RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ZFHX2Q9C0A1 2572 aaPredicted RBP19.8■□□□□ 0.76
SNX17-206ENST00000484886 H0Y626 953 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 GJB6O95452 261 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 CHRM1P11229 460 aaPredicted RBP19.8■□□□□ 0.76
SNX17-206ENST00000484886 PABPC1P11940 636 aaKnown RBP19.8■□□□□ 0.76
SNX17-206ENST00000484886 KRT3P12035 628 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 PDGFRAP16234 1089 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 HLA-FP30511 346 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 SDC4P31431 198 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 CNR2P34972 360 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 PBX1P40424 430 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 ATP11AP98196 1134 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 C1QBPQ07021 282 aaKnown RBP19.8■□□□□ 0.76
SNX17-206ENST00000484886 EIF4EBP2Q13542 120 aaPredicted RBP19.8■□□□□ 0.76
SNX17-206ENST00000484886 EIF4HQ15056 248 aaKnown RBP19.8■□□□□ 0.76
SNX17-206ENST00000484886 CDO1Q16878 200 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 RABGAP1LQ5R372 815 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 DNAJC24Q6P3W2 148 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 CHST9Q7L1S5 443 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 WFDC5Q8TCV5 224 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 WFIKKN2Q8TEU8 576 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 HMGB4Q8WW32 186 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 IQCDQ96DY2 449 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 TPSD1Q9BZJ3 242 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 TKTL2Q9H0I9 626 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 EPC1Q9H2F5 836 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 ELOVL2Q9NXB9 296 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 CALCOCO1Q9P1Z2 691 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 HCN2Q9UL51 889 aa19.8■□□□□ 0.76
SNX17-206ENST00000484886 CCDC163A0A0D9SF12 145 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 A0A1W2PQJ5 194 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 ANKRD62A6NC57 917 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 HRO43593 1189 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 PAGE1O75459 146 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 RPP40O75818 363 aaKnown RBP19.79■□□□□ 0.76
SNX17-206ENST00000484886 SKILP12757 684 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 HNRNPLP14866 589 aaKnown RBP eCLIP19.79■□□□□ 0.76
SNX17-206ENST00000484886 CD70P32970 193 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 RDXP35241 583 aaKnown RBP19.79■□□□□ 0.76
SNX17-206ENST00000484886 CXCR3P49682 368 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 PTP4A2Q12974 167 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 E2F5Q15329 346 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 TDRD12Q587J7 1177 aaKnown RBP19.79■□□□□ 0.76
SNX17-206ENST00000484886 BRMS1LQ5PSV4 323 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 E4F1Q66K89 784 aaPredicted RBP19.79■□□□□ 0.76
SNX17-206ENST00000484886 ACAD10Q6JQN1 1059 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 TRNP1Q6NT89 227 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 PPP1R2P3Q6NXS1 205 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 MON1BQ7L1V2 547 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 ARCQ7LC44 396 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 CIR1Q86X95 450 aaPredicted RBP19.79■□□□□ 0.76
SNX17-206ENST00000484886 AHI1Q8N157 1196 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 JOSD2Q8TAC2 188 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 RXFP2Q8WXD0 754 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 SORCS1Q8WY21 1168 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 NT5C3BQ969T7 300 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 PGAP3Q96FM1 320 aaPredicted RBP19.79■□□□□ 0.76
SNX17-206ENST00000484886 RPRD1AQ96P16 312 aaPredicted RBP19.79■□□□□ 0.76
SNX17-206ENST00000484886 ADAM33Q9BZ11 813 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 TMEM51Q9NW97 253 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 NCDNQ9UBB6 729 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 EBF1Q9UH73 591 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 VANGL2Q9ULK5 521 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 RAD54BQ9Y620 910 aa19.79■□□□□ 0.76
SNX17-206ENST00000484886 TIMM44O43615 452 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 LUC7L3O95232 432 aaKnown RBP19.78■□□□□ 0.76
SNX17-206ENST00000484886 ADCY5O95622 1261 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 HOXD11P31277 338 aaPredicted RBP19.78■□□□□ 0.76
SNX17-206ENST00000484886 GGCXP38435 758 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 ATXN1P54253 815 aaKnown RBP19.78■□□□□ 0.76
SNX17-206ENST00000484886 AUHQ13825 339 aaKnown RBP19.78■□□□□ 0.76
SNX17-206ENST00000484886 STARD3Q14849 445 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 FNDC3BQ53EP0 1204 aaKnown RBP19.78■□□□□ 0.76
SNX17-206ENST00000484886 TTC39BQ5VTQ0 682 aaPredicted RBP19.78■□□□□ 0.76
SNX17-206ENST00000484886 ZNF571Q7Z3V5 609 aaPredicted RBP19.78■□□□□ 0.76
SNX17-206ENST00000484886 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.78■□□□□ 0.76
SNX17-206ENST00000484886 SUMF1Q8NBK3 374 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 C3orf20Q8ND61 904 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 MDGA1Q8NFP4 955 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 FIBINQ8TAL6 211 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 GAB3Q8WWW8 586 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 TAS2R14Q9NYV8 317 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 THAP10Q9P2Z0 257 aaPredicted RBP19.78■□□□□ 0.76
SNX17-206ENST00000484886 PLA2G4CQ9UP65 541 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 LUC7L2Q9Y383 392 aaKnown RBP19.78■□□□□ 0.76
SNX17-206ENST00000484886 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.78■□□□□ 0.76
SNX17-206ENST00000484886 HS3ST4Q9Y661 456 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 STON1Q9Y6Q2 735 aa19.78■□□□□ 0.76
SNX17-206ENST00000484886 PIEZO1Q92508 2521 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 WASH3PC4AMC7 463 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 NPC1O15118 1278 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 POLR2EP19388 210 aaKnown RBP19.77■□□□□ 0.76
SNX17-206ENST00000484886 PRKCIP41743 596 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 ZBED6P86452 979 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 C15orf59Q2T9L4 293 aaPredicted RBP19.77■□□□□ 0.76
SNX17-206ENST00000484886 USP39Q53GS9 565 aaKnown RBP19.77■□□□□ 0.76
SNX17-206ENST00000484886 TMEM215Q68D42 235 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 MBLAC2Q68D91 279 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 FBXL22Q6P050 247 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 DCUN1D2Q6PH85 259 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms