RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 DDX3XO00571 662 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 TRIM24O15164 1050 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 PAGE1O75459 146 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ALDH1A2O94788 518 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 GJB6O95452 261 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 RFC1P35251 1148 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 PTPN9P43378 593 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 CXCR3P49682 368 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 DMC1Q14565 340 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 EIF4HQ15056 248 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 HEATR6Q6AI08 1181 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 SYT13Q7L8C5 426 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 FAM131BQ86XD5 332 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 SFTPA1Q8IWL2 248 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 AHI1Q8N157 1196 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ALLCQ8N6M5 410 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 TXNDC5Q8NBS9 432 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 TSTD1Q8NFU3 115 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 JOSD2Q8TAC2 188 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 KCNV2Q8TDN2 545 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 WFIKKN2Q8TEU8 576 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 FAM172AQ8WUF8 416 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 NELL1Q92832 810 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 PRICKLE1Q96MT3 831 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 SYT11Q9BT88 431 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 FAM126AQ9BYI3 521 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 POLMQ9NP87 494 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ABHD10Q9NUJ1 306 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ABCB8Q9NUT2 735 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 MYO1AQ9UBC5 1043 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 CNOT8Q9UFF9 292 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 XPO7Q9UIA9 1087 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 VANGL2Q9ULK5 521 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 SLC27A6Q9Y2P4 619 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 R4GN57 208 aa12.13□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ATG2BQ96BY7 2078 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 A0A0A0MRY4 1105 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 A0A1B0GVM2 712 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ANTXRLA6NF34 631 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 TCAF2A6NFQ2 919 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 GOLGA6L6A8MZA4 724 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 PROB1E7EW31 1015 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 K7ESF4 209 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ATMINO43313 823 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 TIMM44O43615 452 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 AKR1B10O60218 316 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 MFAP3LO75121 409 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 LUC7L3O95232 432 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 PLEKP08567 350 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 PABPC1P11940 636 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 POLR2EP19388 210 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 TFE3P19532 575 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 PSMA2P25787 234 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 SGSHP51688 502 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ZNF143P52747 638 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ADKP55263 362 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 OXCT1P55809 520 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 RPS24P62847 133 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 AUHQ13825 339 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 C15orf59Q2T9L4 293 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 CCDC14Q49A88 953 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 CCDC122Q5T0U0 273 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 HGSNATQ68CP4 663 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 SCYL2Q6P3W7 929 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 WDR59Q6PJI9 974 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 CHST9Q7L1S5 443 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 STRADAQ7RTN6 431 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 CAMKK1Q8N5S9 505 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 NT5C3BQ969T7 300 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 HHIPQ96QV1 700 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 PPP1R9BQ96SB3 815 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 DNAJC7Q99615 494 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 POLR3BQ9NW08 1133 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ZSCAN32Q9NX65 697 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ARHGEF38Q9NXL2 777 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 BCCIPQ9P287 314 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 GGA2Q9UJY4 613 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 MMP17Q9ULZ9 603 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 PLA2G4CQ9UP65 541 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 HS3ST4Q9Y661 456 aa12.12□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 PRRT4C9JH25 899 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 GFRA2O00451 464 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 NPC1O15118 1278 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 RNF8O76064 485 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ADCY5O95622 1261 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 APBB3O95704 486 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ATP5BP06576 529 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 CISD3P0C7P0 127 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 HOXB2P14652 356 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 NTSR1P30989 418 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 HOXC13P31276 330 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 GGCXP38435 758 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 EIF4A3P38919 411 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 WASP42768 502 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 KIR2DL1P43626 348 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ZNF75DP51815 510 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 DGKEP52429 567 aa12.11□□□□□ -0.47
CDK5RAP2-217ENST00000484546 ATXN1P54253 815 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms