RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PPP6R2O75170 966 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 NDST3O95803 873 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 IFNA2P01563 188 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 GOLGA6DP0CG33 693 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 MYL4P12829 197 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 LTBQ06643 244 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 MSANTD2Q6P1R3 559 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 USP17L6PQ6QN14 398 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 USP43Q70EL4 1123 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 EXD3Q8N9H8 876 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 OR52N4Q8NGI2 321 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 KAT2AQ92830 837 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 ATP2A3Q93084 1043 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 GDF15Q99988 308 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 HTATIP2Q9BUP3 242 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 MAP6D1Q9H9H5 199 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 IL21RQ9HBE5 538 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 SIRT3Q9NTG7 399 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-207ENST00000484275 GOLGA6AQ9NYA3 693 aa4.96□□□□□ -1.62
SCAF11-207ENST00000484275 A0A1W2PPC4 97 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 RPS10-NUDT3A0A1W2PQS6 291 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 PQBP1O60828 265 aaKnown RBP4.95□□□□□ -1.62
SCAF11-207ENST00000484275 CIITAP33076 1130 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 RFX2P48378 723 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 KEAP1Q14145 624 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 P3H1Q32P28 736 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 ZNF628Q5EBL2 1059 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 CAPRIN2Q6IMN6 1127 aaKnown RBP4.95□□□□□ -1.62
SCAF11-207ENST00000484275 HMBOX1Q6NT76 420 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 SKAP1Q86WV1 359 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 NPIPB3Q92617 1050 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 GRAMD1AQ96CP6 724 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 MED30Q96HR3 178 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 URB1-AS1Q96HZ7 61 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 VPS33BQ9H267 617 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 FSCN3Q9NQT6 498 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 PRDM11Q9NQV5 511 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 DDX21Q9NR30 783 aaKnown RBP eCLIP4.95□□□□□ -1.62
SCAF11-207ENST00000484275 TCEAL9Q9UHQ7 104 aa4.95□□□□□ -1.62
SCAF11-207ENST00000484275 DPPA5A6NC42 116 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 PODXLO00592 558 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 MDM4O15151 490 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 CNTN5O94779 1100 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 ACAA1P09110 424 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-207ENST00000484275 EGR1P18146 543 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 MLH1P40692 756 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 CASP5P51878 434 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 SLC37A1P57057 533 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 SLC4A8Q2Y0W8 1093 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 INO80DQ53TQ3 878 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-207ENST00000484275 LRIG3Q6UXM1 1119 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-207ENST00000484275 CTU1Q7Z7A3 348 aaKnown RBP4.94□□□□□ -1.62
SCAF11-207ENST00000484275 PAQR4Q8N4S7 273 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-207ENST00000484275 CCDC33Q8N5R6 958 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 FAM47BQ8NA70 645 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 CLMNQ96JQ2 1002 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 SNX27Q96L92 541 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 EIF3CQ99613 913 aaKnown RBP4.94□□□□□ -1.62
SCAF11-207ENST00000484275 NUDT22Q9BRQ3 303 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 ABHD14AQ9BUJ0 271 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 SF3B5Q9BWJ5 86 aaKnown RBP4.94□□□□□ -1.62
SCAF11-207ENST00000484275 EVPLQ92817 2033 aa4.94□□□□□ -1.62
SCAF11-207ENST00000484275 GXYLT2A0PJZ3 443 aa4.93□□□□□ -1.62
SCAF11-207ENST00000484275 VIPP01282 170 aa4.93□□□□□ -1.62
SCAF11-207ENST00000484275 FGF3P11487 239 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-207ENST00000484275 MT3P25713 68 aa4.93□□□□□ -1.62
SCAF11-207ENST00000484275 WASHC2DQ5SRD0 308 aa4.93□□□□□ -1.62
SCAF11-207ENST00000484275 GLIS1Q8NBF1 620 aa4.93□□□□□ -1.62
SCAF11-207ENST00000484275 CCDC150Q8NCX0 1101 aa4.93□□□□□ -1.62
SCAF11-207ENST00000484275 CENPIQ92674 756 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-207ENST00000484275 PRDM16Q9HAZ2 1276 aa4.93□□□□□ -1.62
SCAF11-207ENST00000484275 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.93□□□□□ -1.62
SCAF11-207ENST00000484275 MDFICQ9P1T7 246 aa4.93□□□□□ -1.62
SCAF11-207ENST00000484275 FOXO6A8MYZ6 492 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 NPC1O15118 1278 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 KRT86O43790 486 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 PRIM2P49643 509 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 KRT81Q14533 505 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 NFATC4Q14934 902 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 PDXDC1Q6P996 788 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 BEND5Q7L4P6 421 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 KRT27Q7Z3Y8 459 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 ADGRF3Q8IZF5 1079 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 PRR26Q8N8Z3 221 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 C7orf57Q8NEG2 295 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 SLC22A17Q8WUG5 538 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 MCRS1Q96EZ8 462 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 ISCUQ9H1K1 167 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 TASP1Q9H6P5 420 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 KCNK9Q9NPC2 374 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 CD93Q9NPY3 652 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 RGL1Q9NZL6 768 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 MAN2B2Q9Y2E5 1009 aa4.92□□□□□ -1.62
SCAF11-207ENST00000484275 CLEC18AA5D8T8 446 aa4.91□□□□□ -1.62
SCAF11-207ENST00000484275 J3KTA2 159 aa4.91□□□□□ -1.62
SCAF11-207ENST00000484275 ACOT8O14734 319 aa4.91□□□□□ -1.62
SCAF11-207ENST00000484275 TAF5LO75529 589 aa4.91□□□□□ -1.62
SCAF11-207ENST00000484275 SLC5A1P13866 664 aa4.91□□□□□ -1.62
SCAF11-207ENST00000484275 TGM2P21980 687 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms