RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 JUPP14923 745 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 RACK1P63244 317 aaKnown RBP13.43□□□□□ -0.26
UBR4-213ENST00000483922 ARID5AQ03989 594 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 ZBTB16Q05516 673 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 PDE4CQ08493 712 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 RTP5Q14D33 572 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 FOXD4L5Q5VV16 416 aaPredicted RBP13.43□□□□□ -0.26
UBR4-213ENST00000483922 ARHGAP17Q68EM7 881 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 RFWD3Q6PCD5 774 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 NCEH1Q6PIU2 408 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 EID2Q8N6I1 236 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 ANKRD52Q8NB46 1076 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 FOXD4L4Q8WXT5 416 aaPredicted RBP13.43□□□□□ -0.26
UBR4-213ENST00000483922 TTC17Q96AE7 1141 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 TMEM176AQ96HP8 235 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 PABPC3Q9H361 631 aaKnown RBP13.43□□□□□ -0.26
UBR4-213ENST00000483922 CAAP1Q9H8G2 361 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 PCDHGA1Q9Y5H4 931 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 FAM47DPA6NHR8 397 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 MAPK13O15264 365 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 LDOC1O95751 146 aaPredicted RBP13.42□□□□□ -0.26
UBR4-213ENST00000483922 SLFN14P0C7P3 912 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 BCAT1P54687 386 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 FAM133BQ5BKY9 247 aaKnown RBP13.42□□□□□ -0.26
UBR4-213ENST00000483922 FSCBQ5H9T9 825 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 ADGRF1Q5T601 910 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 C9orf64Q5T6V5 341 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 PIK3R6Q5UE93 754 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 BSPRYQ5W0U4 402 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 NADSYN1Q6IA69 706 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 MMS22LQ6ZRQ5 1243 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 RSRC2Q7L4I2 434 aaKnown RBP13.42□□□□□ -0.26
UBR4-213ENST00000483922 SPATS2Q86XZ4 545 aaKnown RBP13.42□□□□□ -0.26
UBR4-213ENST00000483922 ARHGAP18Q8N392 663 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 WFIKKN2Q8TEU8 576 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 CNDP2Q96KP4 475 aaKnown RBP13.42□□□□□ -0.26
UBR4-213ENST00000483922 ZNF396Q96N95 335 aaPredicted RBP13.42□□□□□ -0.26
UBR4-213ENST00000483922 FAM129BQ96TA1 746 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 MMRN2Q9H8L6 949 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 FBXL12Q9NXK8 326 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 STRIP2Q9ULQ0 834 aa13.42□□□□□ -0.26
UBR4-213ENST00000483922 MYLKQ15746 1914 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 MAST4O15021 2626 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 A0A1W2PP55 124 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 MID1O15344 667 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 IGLV3-27P01718 113 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 CTSOP43234 321 aaPredicted RBP13.41□□□□□ -0.26
UBR4-213ENST00000483922 E2F5Q15329 346 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 HES3Q5TGS1 186 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 ZNF776Q68DI1 518 aaPredicted RBP13.41□□□□□ -0.26
UBR4-213ENST00000483922 USP30Q70CQ3 517 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 ADAT2Q7Z6V5 191 aaKnown RBP13.41□□□□□ -0.26
UBR4-213ENST00000483922 AHI1Q8N157 1196 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 AADATQ8N5Z0 425 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 UBA3Q8TBC4 463 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 ACE2Q9BYF1 805 aaPredicted RBP13.41□□□□□ -0.26
UBR4-213ENST00000483922 ARHGAP20Q9P2F6 1191 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 SUN2Q9UH99 717 aa13.41□□□□□ -0.26
UBR4-213ENST00000483922 HBS1LQ9Y450 684 aaKnown RBP13.41□□□□□ -0.26
UBR4-213ENST00000483922 TP53BP1Q12888 1972 aaPredicted RBP13.41□□□□□ -0.26
UBR4-213ENST00000483922 TTC34A8MYJ7 566 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 DFNA5O60443 496 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 TBL1XO60907 577 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 RFPL3O75679 317 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 C1SP09871 688 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 PRR29P0C7W0 189 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 POLR2EP19388 210 aaKnown RBP13.4□□□□□ -0.26
UBR4-213ENST00000483922 CD38P28907 300 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 HARS2P49590 506 aaKnown RBP13.4□□□□□ -0.26
UBR4-213ENST00000483922 METAP1P53582 386 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 C21orf59P57076 290 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 NFIL3Q16649 462 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 HNRNPA1L2Q32P51 320 aaKnown RBP13.4□□□□□ -0.26
UBR4-213ENST00000483922 PKDCCQ504Y2 493 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 C6orf118Q5T5N4 469 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 SFMBT2Q5VUG0 894 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 MMAAQ8IVH4 418 aaKnown RBP13.4□□□□□ -0.26
UBR4-213ENST00000483922 DHX40Q8IX18 779 aaKnown RBP13.4□□□□□ -0.26
UBR4-213ENST00000483922 SNIP1Q8TAD8 396 aaKnown RBP13.4□□□□□ -0.26
UBR4-213ENST00000483922 NXPE2Q96DL1 559 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 EEF2KMTQ96G04 330 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 PRICKLE1Q96MT3 831 aaPredicted RBP13.4□□□□□ -0.26
UBR4-213ENST00000483922 FCRL3Q96P31 734 aaPredicted RBP13.4□□□□□ -0.26
UBR4-213ENST00000483922 NRSN2Q9GZP1 204 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 FBRSQ9HAH7 460 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 TMEM8AQ9HCN3 771 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 EXOC1Q9NV70 894 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 ADAMTS1Q9UHI8 967 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 SLCO3A1Q9UIG8 710 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 TSPAN16Q9UKR8 245 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 MAPK8IP1Q9UQF2 711 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 FRMD4BQ9Y2L6 1034 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 AK5Q9Y6K8 562 aa13.4□□□□□ -0.26
UBR4-213ENST00000483922 ARID1BQ8NFD5 2236 aaPredicted RBP13.39□□□□□ -0.27
UBR4-213ENST00000483922 PIK3R2O00459 728 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 XPO1O14980 1071 aaKnown RBP13.39□□□□□ -0.27
UBR4-213ENST00000483922 LATS1O95835 1130 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 FYNP06241 537 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 ITGAVP06756 1048 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 NR2F2P24468 414 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms