RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 A0A087WUV0 522 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 EXOC1LA0A1B0GW35 172 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 CFAP69A5D8W1 941 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 C5orf60A6NFR6 353 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 POC1B-GALNT4F8VUJ3 575 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 F9P00740 461 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 SRGAP2BP0DMP2 458 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 CHN1P15882 459 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 EPHB2P29323 1055 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 AIF1P55008 147 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 TPI1P60174 286 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 STAT4Q14765 748 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 NFE2Q16621 373 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 DENND5BQ6ZUT9 1274 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 CDKL3Q8IVW4 592 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 DCP1BQ8IZD4 617 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 NUP93Q8N1F7 819 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 BCAS4Q8TDM0 211 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 APBB2Q92870 758 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 FUBP3Q96I24 572 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 KIF9Q9HAQ2 790 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 PPANQ9NQ55 473 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 ABCC13Q9NSE7 274 aa9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 PIH1D1Q9NWS0 290 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-204ENST00000483763 SF3B1O75533 1304 aaKnown RBP eCLIP9.11□□□□□ -0.959e-7■■■■■ 35.8
CDC42SE1-204ENST00000483763 E7EVH7 732 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 RNF103O00237 685 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 CDH16O75309 829 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 RPL17P18621 184 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 MAGEA6P43360 314 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 HNRNPH2P55795 449 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 DUSP4Q13115 394 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 OLIG2Q13516 323 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 ARL13BQ3SXY8 428 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 BTBD8Q5XKL5 378 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 VSTM1Q6UX27 236 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 BEND5Q7L4P6 421 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 MPP5Q8N3R9 675 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 FBF1Q8TES7 1133 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 RNF34Q969K3 372 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 CELF6Q96J87 481 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 C8orf48Q96LL4 319 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 TTC25Q96NG3 672 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 SELENOSQ9BQE4 189 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 KLC2Q9H0B6 622 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 SMOC2Q9H3U7 446 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 NDFIP2Q9NV92 336 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 ARHGEF38Q9NXL2 777 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 RRN3Q9NYV6 651 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 GMIPQ9P107 970 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 TBX21Q9UL17 535 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 UNC80Q8N2C7 3258 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 A0A0A0MRY4 1105 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 TCRBV9S1A1TA0A576 114 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 MTMR11A4FU01 709 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 PAGE1O75459 146 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 EFEMP2O95967 443 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 CLTBP09497 229 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 HCAR3P49019 387 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 ZNF280DQ6N043 979 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 LEKR1Q6ZMV7 388 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 PRPF39Q86UA1 669 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 SRRM1Q8IYB3 904 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 ZNF567Q8N184 647 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 VPS52Q8N1B4 723 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 ARFGAP2Q8N6H7 521 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 ANKLE1Q8NAG6 615 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 ATXN2LQ8WWM7 1075 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 ZNF419Q96HQ0 510 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 SPATA13Q96N96 652 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 GORASP1Q9BQQ3 440 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 MLXIPLQ9NP71 852 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 SEPT10Q9P0V9 454 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 LGALS13Q9UHV8 139 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 SCML2Q9UQR0 700 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 PCDHB5Q9Y5E4 795 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 CDY1Q9Y6F8 540 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 PATJQ8NI35 1801 aa9.1□□□□□ -0.95
CDC42SE1-204ENST00000483763 TTC36A6NLP5 189 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 KCNU1A8MYU2 1149 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 C1QAP02745 245 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 CPB1P15086 417 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 MAGEA3P43357 314 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 GLUD2P49448 558 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 GPR17Q13304 367 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 LRRC14Q15048 493 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 PDK1Q15118 436 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 TMED2Q15363 201 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 MGAT5BQ3V5L5 792 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 RASIP1Q5U651 963 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 C1orf53Q5VUE5 145 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 ARHGAP36Q6ZRI8 547 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 CEP128Q6ZU80 1094 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 CROCCP2Q86T23 111 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 MON1AQ86VX9 555 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 PDCD7Q8N8D1 485 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 ATP11CQ8NB49 1132 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 COLGALT1Q8NBJ5 622 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 ZSCAN18Q8TBC5 510 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 FCRL2Q96LA5 508 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms