RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 SGK2Q9HBY8 427 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 CISHQ9NSE2 258 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 SUN2Q9UH99 717 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 GGA2Q9UJY4 613 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 NCKAP1Q9Y2A7 1128 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 CELSR3Q9NYQ7 3312 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 KNL1Q8NG31 2342 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 CEP192Q8TEP8 1941 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 GOLGA6L7A0A1B0GV03 622 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 A0A1W2PPC4 97 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 E9PAM4 449 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 ENC1O14682 589 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 VILLO15195 856 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 MAPK13O15264 365 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 PAPSS1O43252 624 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 MSI1O43347 362 aaKnown RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 LDOC1O95751 146 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 WNT1P04628 370 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 ITGAVP06756 1048 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 KRT13P13646 458 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 POLR2EP19388 210 aaKnown RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 NR2F2P24468 414 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 CD70P32970 193 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 EIF2S3P41091 472 aaKnown RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 SGSHP51688 502 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 GALCP54803 685 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 RACK1P63244 317 aaKnown RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 TARDBPQ13148 414 aaKnown RBP eCLIP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 DNAJC3Q13217 504 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 ADAM9Q13443 819 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 C6orf118Q5T5N4 469 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 BSPRYQ5W0U4 402 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 ZNF776Q68DI1 518 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 ARHGAP17Q68EM7 881 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 RFWD3Q6PCD5 774 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 INTS8Q75QN2 995 aaKnown RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 BHLHA9Q7RTU4 235 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 FAM186BQ8IYM0 893 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 AHI1Q8N157 1196 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 WFDC5Q8TCV5 224 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 GOLGA1Q92805 767 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 TATDN2Q93075 761 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 CNDP2Q96KP4 475 aaKnown RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 SLC6A18Q96N87 628 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 IPO9Q96P70 1041 aaKnown RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 ELF4Q99607 663 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 FBRSQ9HAH7 460 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 EBF2Q9HAK2 575 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 LRRC4Q9HBW1 653 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 TMEM8AQ9HCN3 771 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 OLA1Q9NTK5 396 aaKnown RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 FBXL12Q9NXK8 326 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 STIM2Q9P246 746 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 SERGEFQ9UGK8 458 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 STOML2Q9UJZ1 356 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 MAPK8IP1Q9UQF2 711 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 TRAF3IP3Q9Y228 551 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 HBS1LQ9Y450 684 aaKnown RBP7.69□□□□□ -1.18
CSDE1-206ENST00000483030 PCDHGA1Q9Y5H4 931 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 RAI2Q9Y5P3 530 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 AK5Q9Y6K8 562 aa7.69□□□□□ -1.18
CSDE1-206ENST00000483030 GCN1Q92616 2671 aaKnown RBP7.68□□□□□ -1.18
CSDE1-206ENST00000483030 LOC400499M0QZD8 3231 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 A0A1W2PP55 124 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 YJEFN3A6XGL0 299 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 E7ENQ6 273 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 K7ELQ4 463 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-206ENST00000483030 WNT9AO14904 365 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 TLX3O43711 291 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-206ENST00000483030 TBL1XO60907 577 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 SIN3BO75182 1162 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 ABCB4P21439 1286 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 RPL13P26373 211 aaKnown RBP7.68□□□□□ -1.18
CSDE1-206ENST00000483030 CD38P28907 300 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 GTF2H1P32780 548 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 HNF1BP35680 557 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 PSMC2P35998 433 aaKnown RBP7.68□□□□□ -1.18
CSDE1-206ENST00000483030 ZNF445P59923 1031 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 ADIGQ0VDE8 80 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 KCNJ12Q14500 433 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 SHBQ15464 509 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 GOLGA7BQ2TAP0 167 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 PIK3R6Q5UE93 754 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 KRT39Q6A163 491 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 NCEH1Q6PIU2 408 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 LRRC69Q6ZNQ3 347 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 USP30Q70CQ3 517 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 MMAAQ8IVH4 418 aaKnown RBP7.68□□□□□ -1.18
CSDE1-206ENST00000483030 DHX40Q8IX18 779 aaKnown RBP7.68□□□□□ -1.18
CSDE1-206ENST00000483030 TTC39CQ8N584 583 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 EID2Q8N6I1 236 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 UBA3Q8TBC4 463 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 SAP25Q8TEE9 199 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 COL26A1Q96A83 441 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 SKA1Q96BD8 255 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 NXPE2Q96DL1 559 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 EEF2KMTQ96G04 330 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 RSPH9Q9H1X1 276 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-206ENST00000483030 NEUROG2Q9H2A3 272 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms