RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 MNS1Q8NEH6 495 aa15.53■□□□□ 0.08
PHGDH-205ENST00000482968 MYLIPQ8WY64 445 aa15.53■□□□□ 0.08
PHGDH-205ENST00000482968 USP13Q92995 863 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-205ENST00000482968 FAF2Q96CS3 445 aa15.53■□□□□ 0.08
PHGDH-205ENST00000482968 PABPC5Q96DU9 382 aaKnown RBP15.53■□□□□ 0.08
PHGDH-205ENST00000482968 TDP1Q9NUW8 608 aa15.53■□□□□ 0.08
PHGDH-205ENST00000482968 STIM2Q9P246 746 aa15.53■□□□□ 0.08
PHGDH-205ENST00000482968 RCOR3Q9P2K3 495 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-205ENST00000482968 SAE1Q9UBE0 346 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-205ENST00000482968 ARHGAP26Q9UNA1 814 aa15.53■□□□□ 0.08
PHGDH-205ENST00000482968 SH3BP1Q9Y3L3 701 aa15.53■□□□□ 0.08
PHGDH-205ENST00000482968 CTAGE15A4D2H0 777 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 ZNF487B1APH4 448 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 E9PAM4 449 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 CTAGE8P0CG41 777 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 HCAR3P49019 387 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 C2orf54Q08AI8 447 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 MTA1Q13330 715 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 TFDP2Q14188 446 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 LRRC31Q6UY01 552 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 GET4Q7L5D6 327 aaPredicted RBP15.52■□□□□ 0.08
PHGDH-205ENST00000482968 CTAGE6Q86UF2 777 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 CHSY1Q86X52 802 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 CTAGE4Q8IX94 777 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 LRRN4CLQ8ND94 238 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 ZSCAN18Q8TBC5 510 aaPredicted RBP15.52■□□□□ 0.08
PHGDH-205ENST00000482968 SH3RF2Q8TEC5 729 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 MAIP1Q8WWC4 291 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 FGF13Q92913 245 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 AZIN2Q96A70 460 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 HAUS1Q96CS2 278 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 PRMT1Q99873 361 aaKnown RBP15.52■□□□□ 0.08
PHGDH-205ENST00000482968 FAM118BQ9BPY3 351 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 ARHGEF4Q9NR80 690 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 RBM12Q9NTZ6 932 aaKnown RBP15.52■□□□□ 0.08
PHGDH-205ENST00000482968 ETNK2Q9NVF9 386 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 ZMYM5Q9UJ78 669 aa15.52■□□□□ 0.08
PHGDH-205ENST00000482968 C5orf42Q9H799 3197 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 APOL1O14791 398 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 GREM1O60565 184 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 PRAMEF12O95522 483 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 ERCC2P18074 760 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 TACR2P21452 398 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 SLC6A4P31645 630 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 ZNF135P52742 658 aaPredicted RBP15.52■□□□□ 0.07
PHGDH-205ENST00000482968 SIX1Q15475 284 aaPredicted RBP15.52■□□□□ 0.07
PHGDH-205ENST00000482968 FAM133BQ5BKY9 247 aaKnown RBP15.52■□□□□ 0.07
PHGDH-205ENST00000482968 ADGRF1Q5T601 910 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 FBXL22Q6P050 247 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 RFWD3Q6PCD5 774 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 C1orf228Q6PIY5 440 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 BBS12Q6ZW61 710 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 ZNF572Q7Z3I7 529 aaPredicted RBP15.52■□□□□ 0.07
PHGDH-205ENST00000482968 NPAS3Q8IXF0 933 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 C1orf54Q8WWF1 131 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 CDX2Q99626 313 aaPredicted RBP15.52■□□□□ 0.07
PHGDH-205ENST00000482968 DCLK3Q9C098 648 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 MPP6Q9NZW5 540 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 LSM7Q9UK45 103 aaKnown RBP15.52■□□□□ 0.07
PHGDH-205ENST00000482968 R3HDM2Q9Y2K5 976 aaKnown RBP15.52■□□□□ 0.07
PHGDH-205ENST00000482968 MFHAS1Q9Y4C4 1052 aa15.52■□□□□ 0.07
PHGDH-205ENST00000482968 GOLGA6L10A0A0M3HER8 536 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 TRDMT1O14717 391 aaKnown RBP15.51■□□□□ 0.07
PHGDH-205ENST00000482968 SLU7O95391 586 aaKnown RBP15.51■□□□□ 0.07
PHGDH-205ENST00000482968 NRG1Q02297 640 aaPredicted RBP15.51■□□□□ 0.07
PHGDH-205ENST00000482968 DPYSQ14117 519 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 ARTNQ5T4W7 220 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 MANEALQ5VSG8 457 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 SLC9A4Q6AI14 798 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 NPNTQ6UXI9 565 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 HTR3DQ70Z44 454 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 LGI2Q8N0V4 545 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 PLD5Q8N7P1 536 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 PRELID2Q8N945 189 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 ATG4AQ8WYN0 398 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 IGSF8Q969P0 613 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 TBC1D31Q96DN5 1066 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 MYEOVQ96EZ4 313 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 MSLNLQ96KJ4 702 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 RPRD1AQ96P16 312 aaPredicted RBP15.51■□□□□ 0.07
PHGDH-205ENST00000482968 HEY1Q9Y5J3 304 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 EYSQ5T1H1 3165 aa15.51■□□□□ 0.07
PHGDH-205ENST00000482968 HELZP42694 1942 aaKnown RBP15.51■□□□□ 0.07
PHGDH-205ENST00000482968 XIRP2A4UGR9 3374 aa15.5■□□□□ 0.07
PHGDH-205ENST00000482968 F5H5T6 163 aa15.5■□□□□ 0.07
PHGDH-205ENST00000482968 SNX1Q13596 522 aa15.5■□□□□ 0.07
PHGDH-205ENST00000482968 COL19A1Q14993 1142 aa15.5■□□□□ 0.07
PHGDH-205ENST00000482968 ACBD5Q5T8D3 534 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-205ENST00000482968 Q6ZNB5 142 aa15.5■□□□□ 0.07
PHGDH-205ENST00000482968 DDX42Q86XP3 938 aaKnown RBP eCLIP15.5■□□□□ 0.07
PHGDH-205ENST00000482968 KLHL7Q8IXQ5 586 aa15.5■□□□□ 0.07
PHGDH-205ENST00000482968 ZNF683Q8IZ20 524 aa15.5■□□□□ 0.07
PHGDH-205ENST00000482968 CFAP52Q8N1V2 620 aa15.5■□□□□ 0.07
PHGDH-205ENST00000482968 PPM1EQ8WY54 764 aa15.5■□□□□ 0.07
PHGDH-205ENST00000482968 P3H4Q92791 437 aa15.5■□□□□ 0.07
PHGDH-205ENST00000482968 MAGOHBQ96A72 148 aaKnown RBP15.5■□□□□ 0.07
PHGDH-205ENST00000482968 RIPOR3Q96MK2 946 aa15.5■□□□□ 0.07
PHGDH-205ENST00000482968 DCLK1O15075 740 aa15.49■□□□□ 0.07
PHGDH-205ENST00000482968 TSPAN3O60637 253 aa15.49■□□□□ 0.07
PHGDH-205ENST00000482968 MAP3K6O95382 1288 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms