RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ACDQ96AP0 544 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 PRICKLE1Q96MT3 831 aaPredicted RBP21.64■■□□□ 1.05
SEC13-217ENST00000482647 PRMT8Q9NR22 394 aaPredicted RBP21.64■■□□□ 1.05
SEC13-217ENST00000482647 STIM2Q9P246 746 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 CNOT8Q9UFF9 292 aaKnown RBP21.64■■□□□ 1.05
SEC13-217ENST00000482647 CLEC4EQ9ULY5 219 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 HS3ST4Q9Y661 456 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 MIA3Q5JRA6 1907 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 MUC6Q6W4X9 2439 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 MYOFQ9NZM1 2061 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 KIR2DL1P43626 348 aaPredicted RBP21.63■■□□□ 1.05
SEC13-217ENST00000482647 ATXN1P54253 815 aaKnown RBP21.63■■□□□ 1.05
SEC13-217ENST00000482647 RPL7AP62424 266 aaKnown RBP21.63■■□□□ 1.05
SEC13-217ENST00000482647 RPS24P62847 133 aaKnown RBP21.63■■□□□ 1.05
SEC13-217ENST00000482647 SATB1Q01826 763 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 ZNF528Q3MIS6 628 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 ARL13BQ3SXY8 428 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 HSF5Q4G112 596 aaPredicted RBP21.63■■□□□ 1.05
SEC13-217ENST00000482647 CCDC122Q5T0U0 273 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 EMC10Q5UCC4 262 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 TTC39BQ5VTQ0 682 aaPredicted RBP21.63■■□□□ 1.05
SEC13-217ENST00000482647 RNF43Q68DV7 783 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 PKN3Q6P5Z2 889 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 ALKBH5Q6P6C2 394 aaKnown RBP21.63■■□□□ 1.05
SEC13-217ENST00000482647 ANKS1BQ7Z6G8 1248 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 FAM131BQ86XD5 332 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 CFAP52Q8N1V2 620 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 FAM172AQ8WUF8 416 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 ZNF653Q96CK0 615 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 C1orf74Q96LT6 269 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 SIK2Q9H0K1 926 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 DEF6Q9H4E7 631 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 MRPL47Q9HD33 250 aaKnown RBP21.63■■□□□ 1.05
SEC13-217ENST00000482647 SLC8A2Q9UPR5 921 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 SCINQ9Y6U3 715 aa21.63■■□□□ 1.05
SEC13-217ENST00000482647 SSU72P8A0A1W2PR75 194 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 PRRT4C9JH25 899 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 ATMINO43313 823 aaPredicted RBP21.62■■□□□ 1.05
SEC13-217ENST00000482647 TIMM44O43615 452 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 PAPSS2O95340 614 aaPredicted RBP21.62■■□□□ 1.05
SEC13-217ENST00000482647 SP9P0CG40 484 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 TIE1P35590 1138 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 MAPK8IP2Q13387 824 aaPredicted RBP21.62■■□□□ 1.05
SEC13-217ENST00000482647 SH3PXD2AQ5TCZ1 1133 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 FBXL22Q6P050 247 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 SYT13Q7L8C5 426 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 TRMT11Q7Z4G4 463 aaKnown RBP21.62■■□□□ 1.05
SEC13-217ENST00000482647 MFN1Q8IWA4 741 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 MYEOVQ96EZ4 313 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 RPRD1AQ96P16 312 aaPredicted RBP21.62■■□□□ 1.05
SEC13-217ENST00000482647 HAPLN3Q96S86 360 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 CNPY3Q9BT09 278 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 ANLNQ9NQW6 1124 aa21.62■■□□□ 1.05
SEC13-217ENST00000482647 CDH18Q13634 790 aa21.61■■□□□ 1.05
SEC13-217ENST00000482647 E2F5Q15329 346 aa21.61■■□□□ 1.05
SEC13-217ENST00000482647 GEN1Q17RS7 908 aa21.61■■□□□ 1.05
SEC13-217ENST00000482647 LRRC31Q6UY01 552 aa21.61■■□□□ 1.05
SEC13-217ENST00000482647 CARNMT1Q8N4J0 409 aa21.61■■□□□ 1.05
SEC13-217ENST00000482647 CCDC33Q8N5R6 958 aa21.61■■□□□ 1.05
SEC13-217ENST00000482647 ALLCQ8N6M5 410 aa21.61■■□□□ 1.05
SEC13-217ENST00000482647 ZNF513Q8N8E2 541 aaPredicted RBP21.61■■□□□ 1.05
SEC13-217ENST00000482647 FIBINQ8TAL6 211 aa21.61■■□□□ 1.05
SEC13-217ENST00000482647 ATOH1Q92858 354 aaPredicted RBP21.61■■□□□ 1.05
SEC13-217ENST00000482647 CCDC42Q96M95 316 aa21.61■■□□□ 1.05
SEC13-217ENST00000482647 FAM126AQ9BYI3 521 aaPredicted RBP21.61■■□□□ 1.05
SEC13-217ENST00000482647 C2orf42Q9NWW7 574 aa21.61■■□□□ 1.05
SEC13-217ENST00000482647 MYO1AQ9UBC5 1043 aa21.61■■□□□ 1.05
SEC13-217ENST00000482647 VANGL2Q9ULK5 521 aa21.61■■□□□ 1.05
SEC13-217ENST00000482647 ANTXRLA6NF34 631 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 TMEM191CA6NGB0 347 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 I6L893 689 aaPredicted RBP21.6■■□□□ 1.05
SEC13-217ENST00000482647 AKR1B10O60218 316 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 LUC7L3O95232 432 aaKnown RBP21.6■■□□□ 1.05
SEC13-217ENST00000482647 KLF8O95600 359 aaPredicted RBP21.6■■□□□ 1.05
SEC13-217ENST00000482647 HLA-FP30511 346 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 ADRA1BP35368 520 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 NRLP54845 237 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 HDAC4P56524 1084 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 GFPT1Q06210 699 aaPredicted RBP21.6■■□□□ 1.05
SEC13-217ENST00000482647 EIF4HQ15056 248 aaKnown RBP21.6■■□□□ 1.05
SEC13-217ENST00000482647 SLC18A3Q16572 532 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 SDE2Q6IQ49 451 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 TSSK4Q6SA08 328 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 IL17RCQ8NAC3 791 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 TXNDC5Q8NBS9 432 aaKnown RBP21.6■■□□□ 1.05
SEC13-217ENST00000482647 WFIKKN2Q8TEU8 576 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 UCMAQ8WVF2 138 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 ABCB8Q9NUT2 735 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 GGA2Q9UJY4 613 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 MMP17Q9ULZ9 603 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 CACNA1HO95180 2353 aa21.6■■□□□ 1.05
SEC13-217ENST00000482647 H0Y626 953 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 CCP110O43303 1012 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 CHRM1P11229 460 aaPredicted RBP21.59■■□□□ 1.05
SEC13-217ENST00000482647 PSMA2P25787 234 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 DMC1Q14565 340 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 ASTE1Q2TB18 679 aaPredicted RBP21.59■■□□□ 1.05
SEC13-217ENST00000482647 C5orf22Q49AR2 442 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 RAB6CQ53S08 254 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 EOGTQ5NDL2 527 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms