RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 ADAMDEC1O15204 470 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 HNRNPCL1O60812 293 aaKnown RBP7.66□□□□□ -1.18
RBM39-233ENST00000482563 FDPSP14324 419 aaKnown RBP7.66□□□□□ -1.18
RBM39-233ENST00000482563 HTR7P34969 479 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 LIG4P49917 911 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 EIF3BP55884 814 aaKnown RBP7.66□□□□□ -1.18
RBM39-233ENST00000482563 HMGN5P82970 282 aaKnown RBP7.66□□□□□ -1.18
RBM39-233ENST00000482563 CYP4F8P98187 520 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 THOC5Q13769 683 aaKnown RBP7.66□□□□□ -1.18
RBM39-233ENST00000482563 TUBB2AQ13885 445 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 SF3B3Q15393 1217 aaKnown RBP7.66□□□□□ -1.18
RBM39-233ENST00000482563 TBRG1Q3YBR2 411 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 CRY2Q49AN0 593 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 KIAA1324Q6UXG2 1013 aaKnown RBP7.66□□□□□ -1.18
RBM39-233ENST00000482563 DSG4Q86SJ6 1040 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 CEP76Q8TAP6 659 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 SYAP1Q96A49 352 aaPredicted RBP7.66□□□□□ -1.18
RBM39-233ENST00000482563 MEGF10Q96KG7 1140 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 DGAT2Q96PD7 388 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 PRAM1Q96QH2 718 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 SRSF8Q9BRL6 282 aaKnown RBP7.66□□□□□ -1.18
RBM39-233ENST00000482563 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.66□□□□□ -1.18
RBM39-233ENST00000482563 TUBB2BQ9BVA1 445 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 TTYH3Q9C0H2 523 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 REXO4Q9GZR2 422 aaKnown RBP7.66□□□□□ -1.18
RBM39-233ENST00000482563 TAS2R3Q9NYW6 316 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 FETUBQ9UGM5 382 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 DRG1Q9Y295 367 aaKnown RBP7.66□□□□□ -1.18
RBM39-233ENST00000482563 COL15A1P39059 1388 aa7.66□□□□□ -1.18
RBM39-233ENST00000482563 A0A1W2PRV1 198 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 OR6C76A6NM76 312 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 TMEM110-MUSTN1A8MSY1 372 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 WDR46O15213 610 aaKnown RBP7.65□□□□□ -1.18
RBM39-233ENST00000482563 TLR2O60603 784 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 PNPP00491 289 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 RB1P06400 928 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 HEXBP07686 556 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 COX7A2P14406 83 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 PIP4K2AP48426 406 aaPredicted RBP7.65□□□□□ -1.18
RBM39-233ENST00000482563 ADARP55265 1226 aaKnown RBP7.65□□□□□ -1.18
RBM39-233ENST00000482563 RALGPS1Q5JS13 557 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 SPDYAQ5MJ70 313 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 MAMDC4Q6UXC1 1216 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 LINC00114Q6XXX2 140 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 ARHGAP27Q6ZUM4 889 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 SFRP1Q8N474 314 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 MBD3L2Q8NHZ7 208 aaPredicted RBP7.65□□□□□ -1.18
RBM39-233ENST00000482563 SLC35B2Q8TB61 432 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 DNAJB14Q8TBM8 379 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 BICD2Q8TD16 824 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 LENG1Q96BZ8 264 aaPredicted RBP7.65□□□□□ -1.18
RBM39-233ENST00000482563 KLHL29Q96CT2 875 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 TMCO6Q96DC7 493 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 LIN37Q96GY3 246 aaPredicted RBP7.65□□□□□ -1.18
RBM39-233ENST00000482563 KLHL32Q96NJ5 620 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 SLC46A1Q96NT5 459 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 PAAF1Q9BRP4 392 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 MRI1Q9BV20 369 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 SH2D4AQ9H788 454 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 MPP6Q9NZW5 540 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 USP21Q9UK80 565 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 CPSF3Q9UKF6 684 aaKnown RBP7.65□□□□□ -1.18
RBM39-233ENST00000482563 CDC42EP3Q9UKI2 254 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 AP1M2Q9Y6Q5 423 aa7.65□□□□□ -1.18
RBM39-233ENST00000482563 BOLA2-SMG1P6H3BVE0 249 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 SRGAP3O43295 1099 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 VPS4BO75351 444 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 RECQL5O94762 991 aaPredicted RBP7.64□□□□□ -1.19
RBM39-233ENST00000482563 SNX4O95219 450 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 CFIP05156 583 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 IL15P40933 162 aaPredicted RBP7.64□□□□□ -1.19
RBM39-233ENST00000482563 EPHB3P54753 998 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 TUBB4BP68371 445 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 FAM47AQ5JRC9 791 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 WDR93Q6P2C0 686 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 ZCCHC12Q6PEW1 402 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 PARS2Q7L3T8 475 aaKnown RBP7.64□□□□□ -1.19
RBM39-233ENST00000482563 CXXC5Q7LFL8 322 aaKnown RBP7.64□□□□□ -1.19
RBM39-233ENST00000482563 CNTN4Q8IWV2 1026 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 PEX5LQ8IYB4 626 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 SYCP3Q8IZU3 236 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 FBXO30Q8TB52 745 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 SETD6Q8TBK2 473 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 CORO2AQ92828 525 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 NLRP4Q96MN2 994 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 ALPK1Q96QP1 1244 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 FAM83CQ9BQN1 747 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 CTDSP1Q9GZU7 261 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 TTC12Q9H892 705 aaPredicted RBP7.64□□□□□ -1.19
RBM39-233ENST00000482563 CARS2Q9HA77 564 aaKnown RBP7.64□□□□□ -1.19
RBM39-233ENST00000482563 ALKBH4Q9NXW9 302 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 ZFP69BQ9UJL9 534 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 NUDT5Q9UKK9 219 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 SPAG9O60271 1321 aaKnown RBP7.64□□□□□ -1.19
RBM39-233ENST00000482563 PNPLA7Q6ZV29 1317 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 TRBC2A0A5B9 178 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 M0QZQ0 153 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 PGRMC2O15173 223 aa7.64□□□□□ -1.19
RBM39-233ENST00000482563 CD3EAPO15446 510 aaKnown RBP7.64□□□□□ -1.19
RBM39-233ENST00000482563 STX6O43752 255 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms