RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TUBB3Q13509 450 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 STILQ15468 1287 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 TMPRSS6Q8IU80 811 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 CRLF3Q8IUI8 442 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 LMNTD2Q8IXW0 634 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 DNAJC5GQ8N7S2 189 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 APBB2Q92870 758 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 PANX3Q96QZ0 392 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 SETD4Q9NVD3 440 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 PSAT1Q9Y617 370 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 PTCH2Q9Y6C5 1203 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 ZNF487B1APH4 448 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 BIRC5O15392 142 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 PRKCGP05129 697 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 PTPN9P43378 593 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 RPL10AP62906 217 aaKnown RBP15.31■□□□□ 0.04
ATG4B-220ENST00000482507 FSCN1Q16658 493 aaKnown RBP15.31■□□□□ 0.04
ATG4B-220ENST00000482507 FASTKD1Q53R41 847 aaKnown RBP15.31■□□□□ 0.04
ATG4B-220ENST00000482507 STEAP4Q687X5 459 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 MBLAC2Q68D91 279 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 TIFABQ6ZNK6 161 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 CFAP61Q8NHU2 1237 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 CEP41Q9BYV8 373 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 TMPRSS4Q9NRS4 437 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 WBP1LQ9NX94 342 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 SAGE1Q9NXZ1 904 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 IL1RAPL1Q9NZN1 696 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 TAGLN3Q9UI15 199 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 HES2Q9Y543 173 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 SDR42E2A6NKP2 422 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 MEI4A8MW99 385 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 SEPT4O43236 478 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 DGKIO75912 1065 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 FGF3P11487 239 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-220ENST00000482507 LCP1P13796 627 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 ARRB2P32121 409 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 PSEN1P49768 467 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 NIPAL4Q0D2K0 466 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 GRIK3Q13003 919 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 IRF5Q13568 498 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 GLRA4Q5JXX5 417 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 TEDDM1Q5T9Z0 273 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 MTHFD1LQ6UB35 978 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 RIPOR1Q6ZS17 1223 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 ULK2Q8IYT8 1036 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 ARNTL2Q8WYA1 636 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 NDRG1Q92597 394 aaKnown RBP15.31■□□□□ 0.04
ATG4B-220ENST00000482507 OLFM3Q96PB7 478 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 YIPF3Q9GZM5 350 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 XAB2Q9HCS7 855 aaKnown RBP15.31■□□□□ 0.04
ATG4B-220ENST00000482507 SNTG2Q9NY99 539 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 SLC7A8Q9UHI5 535 aa15.31■□□□□ 0.04
ATG4B-220ENST00000482507 CITO14578 2027 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 DUSP11O75319 330 aaKnown RBP15.3■□□□□ 0.04
ATG4B-220ENST00000482507 TM7SF2O76062 418 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 ALDH1A2O94788 518 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 NPTXRO95502 500 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 KCNA4P22459 653 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 ADORA2BP29275 332 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 GRM5P41594 1212 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 SERPINB9P50453 376 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 KLC1Q07866 573 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 AP1B1Q10567 949 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 PDE1CQ14123 709 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-220ENST00000482507 MARCH8Q5T0T0 291 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 N4BP2L1Q5TBK1 243 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-220ENST00000482507 HEATR6Q6AI08 1181 aaKnown RBP15.3■□□□□ 0.04
ATG4B-220ENST00000482507 CXCL17Q6UXB2 119 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 MAVSQ7Z434 540 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 SCUBE1Q8IWY4 988 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 TTC39CQ8N584 583 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 RAB3IL1Q8TBN0 382 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 STMN2Q93045 179 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 THTPAQ9BU02 230 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 APOL6Q9BWW8 343 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 GTF2IRD1Q9UHL9 959 aa15.3■□□□□ 0.04
ATG4B-220ENST00000482507 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-220ENST00000482507 TPP1O14773 563 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 INHAP05111 366 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 PDGFRBP09619 1106 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 SETSIPP0DME0 302 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 LMO2P25791 158 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 CPOXP36551 454 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 PITX1P78337 314 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-220ENST00000482507 MRPS35P82673 323 aaKnown RBP15.29■□□□□ 0.04
ATG4B-220ENST00000482507 CDK18Q07002 472 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 WASHC5Q12768 1159 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 HIC1Q14526 733 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 TMEM154Q6P9G4 183 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 C4orf22Q6V702 233 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 PACS1Q6VY07 963 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 SLC26A9Q7LBE3 791 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 OR6B3Q8NGW1 331 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 HTR3CQ8WXA8 447 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 RILPQ96NA2 401 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 XPNPEP3Q9NQH7 507 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 THAP1Q9NVV9 213 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 A8MXQ7 604 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 SPECC1L-ADORA2AF8WAN1 911 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 MFSD11O43934 449 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms