RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 AZIN2Q96A70 460 aa19.27■□□□□ 0.68
CLK1-211ENST00000481641 SLC39A13Q96H72 371 aa19.27■□□□□ 0.68
CLK1-211ENST00000481641 LMLNQ96KR4 655 aa19.27■□□□□ 0.68
CLK1-211ENST00000481641 SERPINB11Q96P15 392 aa19.27■□□□□ 0.68
CLK1-211ENST00000481641 MIR1-1HGQ9H1L0 117 aa19.27■□□□□ 0.68
CLK1-211ENST00000481641 AJAP1Q9UKB5 411 aaPredicted RBP19.27■□□□□ 0.68
CLK1-211ENST00000481641 TLR6Q9Y2C9 796 aa19.27■□□□□ 0.68
CLK1-211ENST00000481641 FRYQ5TBA9 3013 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 SPAARA0A1B0GVQ0 90 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 MED7O43513 233 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 OPHN1O60890 802 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 POLR2EP19388 210 aaKnown RBP19.26■□□□□ 0.67
CLK1-211ENST00000481641 OXTRP30559 389 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 TAF5Q15542 800 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 MPP7Q5T2T1 576 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 MMS22LQ6ZRQ5 1243 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 PIP4P1Q86T03 277 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 MFN1Q8IWA4 741 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 CARNMT1Q8N4J0 409 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 HDDC3Q8N4P3 179 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 ZCCHC9Q8N567 271 aaKnown RBP19.26■□□□□ 0.67
CLK1-211ENST00000481641 HJURPQ8NCD3 748 aaPredicted RBP19.26■□□□□ 0.67
CLK1-211ENST00000481641 PRSS16Q9NQE7 514 aa19.26■□□□□ 0.67
CLK1-211ENST00000481641 INTS6Q9UL03 887 aaKnown RBP19.26■□□□□ 0.67
CLK1-211ENST00000481641 CAPN9O14815 690 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 IRAK2O43187 625 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 SART1O43290 800 aaKnown RBP19.25■□□□□ 0.67
CLK1-211ENST00000481641 IGLV3-19P01714 112 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 SYPP08247 313 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 DLDP09622 509 aaKnown RBP19.25■□□□□ 0.67
CLK1-211ENST00000481641 FAM193AP78312 1265 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 DCAF6Q58WW2 860 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 ZC3H12AQ5D1E8 599 aaKnown RBP19.25■□□□□ 0.67
CLK1-211ENST00000481641 FSCBQ5H9T9 825 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 MS4A13Q5J8X5 152 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 GBP6Q6ZN66 633 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 ENOSF1Q7L5Y1 443 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 TMEM110Q86TL2 294 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 PASD1Q8IV76 773 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 WDTC1Q8N5D0 677 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 FIBINQ8TAL6 211 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 STK32AQ8WU08 396 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 DNASE2BQ8WZ79 361 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 NUP58Q9BVL2 599 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 LHX5Q9H2C1 402 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 SLC32A1Q9H598 525 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 SUSD2Q9UGT4 822 aa19.25■□□□□ 0.67
CLK1-211ENST00000481641 USP24Q9UPU5 2620 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 METTL12A8MUP2 240 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 ATP5BP06576 529 aaKnown RBP19.24■□□□□ 0.67
CLK1-211ENST00000481641 CD59P13987 128 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 GNSP15586 552 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 PON1P27169 355 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 ACSL1P33121 698 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 MTIF2P46199 727 aaKnown RBP19.24■□□□□ 0.67
CLK1-211ENST00000481641 NUMBP49757 651 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 RPS14P62263 151 aaKnown RBP19.24■□□□□ 0.67
CLK1-211ENST00000481641 PDCLQ13371 301 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 EXOC3L4Q17RC7 722 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 RAP1GAP2Q684P5 730 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 LGI2Q8N0V4 545 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 CADM4Q8NFZ8 388 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 MYO19Q96H55 970 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 DDX50Q9BQ39 737 aaKnown RBP19.24■□□□□ 0.67
CLK1-211ENST00000481641 C6orf106Q9H6K1 298 aaPredicted RBP19.24■□□□□ 0.67
CLK1-211ENST00000481641 SIX2Q9NPC8 291 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 APEX2Q9UBZ4 518 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 EIF2B4Q9UI10 523 aaKnown RBP19.24■□□□□ 0.67
CLK1-211ENST00000481641 WASF3Q9UPY6 502 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 SLCO1B1Q9Y6L6 691 aa19.24■□□□□ 0.67
CLK1-211ENST00000481641 A0A1B0GTW7 788 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 TRUB2O95900 331 aaKnown RBP19.23■□□□□ 0.67
CLK1-211ENST00000481641 PNMA6AP0CW24 399 aaPredicted RBP19.23■□□□□ 0.67
CLK1-211ENST00000481641 CSKP41240 450 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 CTSOP43234 321 aaPredicted RBP19.23■□□□□ 0.67
CLK1-211ENST00000481641 YWHAZP63104 245 aaKnown RBP19.23■□□□□ 0.67
CLK1-211ENST00000481641 GRIK2Q13002 908 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 NNTQ13423 1086 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 MEA1Q16626 185 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 BEND5Q7L4P6 421 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 SHC3Q92529 594 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 SNX19Q92543 992 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 TTC17Q96AE7 1141 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 CAMK1GQ96NX5 476 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 CPXM1Q96SM3 734 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 IRX2Q9BZI1 471 aaPredicted RBP19.23■□□□□ 0.67
CLK1-211ENST00000481641 THAP9Q9H5L6 903 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 POPDC2Q9HBU9 364 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 CHMP5Q9NZZ3 219 aa19.23■□□□□ 0.67
CLK1-211ENST00000481641 KNL1Q8NG31 2342 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 SYNJ2BP-COX16A0A087WUM0 186 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 UPK3BL1B0FP48 263 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 UPK3BL2E5RIL1 263 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 GJB3O75712 270 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 GRAP2O75791 330 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 APOEP02649 317 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 TACR2P21452 398 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 SIM1P81133 766 aaPredicted RBP19.22■□□□□ 0.67
CLK1-211ENST00000481641 CDH18Q13634 790 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 TPD52L1Q16890 204 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms