RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SLC12A6Q9UHW9 1150 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 XPO7Q9UIA9 1087 aaKnown RBP17.63■□□□□ 0.41
HSPG2-209ENST00000480900 MBD1Q9UIS9 605 aaPredicted RBP17.63■□□□□ 0.41
HSPG2-209ENST00000480900 CDV3Q9UKY7 258 aaKnown RBP17.63■□□□□ 0.41
HSPG2-209ENST00000480900 NYNRINQ9P2P1 1898 aaKnown RBP17.63■□□□□ 0.41
HSPG2-209ENST00000480900 EPHB6O15197 1021 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 MAP3K13O43283 966 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 GFPT2O94808 682 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 CDK11BP21127 795 aaKnown RBP17.62■□□□□ 0.41
HSPG2-209ENST00000480900 CCR1P32246 355 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 SOX5P35711 763 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 MTA1Q13330 715 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 SYCP1Q15431 976 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 FUT11Q495W5 492 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 SERPINA13PQ6UXR4 307 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 APTXQ7Z2E3 356 aaKnown RBP17.62■□□□□ 0.41
HSPG2-209ENST00000480900 ERMP1Q7Z2K6 904 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 ADIPOR2Q86V24 386 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 CHSY1Q86X52 802 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 ERICH1Q86X53 443 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 MFN1Q8IWA4 741 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 AOPEPQ8N6M6 819 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 MSANTD4Q8NCY6 345 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 FIBINQ8TAL6 211 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 C18orf8Q96DM3 657 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 MYEOVQ96EZ4 313 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 SPAG5Q96R06 1193 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 ERGIC2Q96RQ1 377 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 RRN3Q9NYV6 651 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 STIM2Q9P246 746 aa17.62■□□□□ 0.41
HSPG2-209ENST00000480900 NOCTQ9UK39 431 aaKnown RBP17.62■□□□□ 0.41
HSPG2-209ENST00000480900 KCNU1A8MYU2 1149 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 SYNCRIPO60506 623 aaKnown RBP17.61■□□□□ 0.41
HSPG2-209ENST00000480900 ATP5BP06576 529 aaKnown RBP17.61■□□□□ 0.41
HSPG2-209ENST00000480900 MMEP08473 750 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 TACR2P21452 398 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 PRKCHP24723 683 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 CD70P32970 193 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 NOS2P35228 1153 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 MATKP42679 507 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 DHPSP49366 369 aaPredicted RBP17.61■□□□□ 0.41
HSPG2-209ENST00000480900 NOMO3P69849 1222 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 UBXN1Q04323 297 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 CDH18Q13634 790 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 SF3A2Q15428 464 aaKnown RBP17.61■□□□□ 0.41
HSPG2-209ENST00000480900 CCDC6Q16204 474 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 ANO6Q4KMQ2 910 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 RAP1GAP2Q684P5 730 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 MBLAC2Q68D91 279 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 CAVIN1Q6NZI2 390 aaKnown RBP17.61■□□□□ 0.41
HSPG2-209ENST00000480900 SLC36A4Q6YBV0 504 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 CYP2U1Q7Z449 544 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 METTL3Q86U44 580 aaKnown RBP17.61■□□□□ 0.41
HSPG2-209ENST00000480900 XYLT1Q86Y38 959 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 CCDC117Q8IWD4 279 aaPredicted RBP17.61■□□□□ 0.41
HSPG2-209ENST00000480900 LGI2Q8N0V4 545 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 FRMD1Q8N878 549 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 C12orf50Q8NA57 414 aaPredicted RBP17.61■□□□□ 0.41
HSPG2-209ENST00000480900 NEK11Q8NG66 645 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 ERLEC1Q96DZ1 483 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 LMLNQ96KR4 655 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 BPIFA3Q9BQP9 254 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 NLRC4Q9NPP4 1024 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 PLA2G4CQ9UP65 541 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 ASCC3Q8N3C0 2202 aaKnown RBP17.61■□□□□ 0.41
HSPG2-209ENST00000480900 NCOR2Q9Y618 2525 aa17.61■□□□□ 0.41
HSPG2-209ENST00000480900 SYNJ2BP-COX16A0A087WUM0 186 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 IGHV1OR15-9A0A0B4J2B8 117 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 F5H5T6 163 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 AP5Z1O43299 807 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 LUC7L3O95232 432 aaKnown RBP17.6■□□□□ 0.41
HSPG2-209ENST00000480900 CAVIN2O95810 425 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 DLDP09622 509 aaKnown RBP17.6■□□□□ 0.41
HSPG2-209ENST00000480900 ABCB4P21439 1286 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 STAT1P42224 750 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 CDR2Q01850 454 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 AASDHQ4L235 1098 aaPredicted RBP17.6■□□□□ 0.41
HSPG2-209ENST00000480900 FNDC3BQ53EP0 1204 aaKnown RBP17.6■□□□□ 0.41
HSPG2-209ENST00000480900 CARNMT1Q8N4J0 409 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 CYB5D2Q8WUJ1 264 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 RNF34Q969K3 372 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 PCMTD1Q96MG8 357 aaPredicted RBP17.6■□□□□ 0.41
HSPG2-209ENST00000480900 NPY6RQ99463 290 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 PRMT1Q99873 361 aaKnown RBP17.6■□□□□ 0.41
HSPG2-209ENST00000480900 RTKNQ9BST9 563 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 TMEM245Q9H330 911 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 PRDM16Q9HAZ2 1276 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 TMEM51Q9NW97 253 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.6■□□□□ 0.41
HSPG2-209ENST00000480900 COX16Q9P0S2 106 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 STAP1Q9ULZ2 295 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 KNL1Q8NG31 2342 aa17.6■□□□□ 0.41
HSPG2-209ENST00000480900 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.59■□□□□ 0.41
HSPG2-209ENST00000480900 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.59■□□□□ 0.41
HSPG2-209ENST00000480900 M0QYT0 321 aa17.59■□□□□ 0.41
HSPG2-209ENST00000480900 SLC30A4O14863 429 aa17.59■□□□□ 0.41
HSPG2-209ENST00000480900 EPHX1P07099 455 aa17.59■□□□□ 0.41
HSPG2-209ENST00000480900 ATP1A3P13637 1013 aa17.59■□□□□ 0.41
HSPG2-209ENST00000480900 POLR2EP19388 210 aaKnown RBP17.59■□□□□ 0.41
HSPG2-209ENST00000480900 DPP6P42658 865 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms