RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 RAB6CQ9H0N0 254 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 CTTNBP2NLQ9P2B4 639 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 DEC1Q9P2X7 70 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 IP6K2Q9UHH9 426 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 ANAPC7Q9UJX3 599 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 SIT1Q9Y3P8 196 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 FAM170BA6NMN3 283 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 STK25O00506 426 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 TSPAN3O60637 253 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 MTA2O94776 668 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 PCK1P35558 622 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 MAGEA1P43355 309 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 MAGEA9P43362 315 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 RPS9P46781 194 aaKnown RBP20.41■□□□□ 0.86
LIME1-205ENST00000480139 SLC6A11P48066 632 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 SGSHP51688 502 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 FZD5Q13467 585 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 AUHQ13825 339 aaKnown RBP20.41■□□□□ 0.86
LIME1-205ENST00000480139 LRRC32Q14392 662 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 DGKKQ5KSL6 1271 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 RABGAP1LQ5R372 815 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 NAIF1Q69YI7 327 aaPredicted RBP20.41■□□□□ 0.86
LIME1-205ENST00000480139 FSTL4Q6MZW2 842 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 LGI2Q8N0V4 545 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 SYNPOQ8N3V7 929 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 CCDC112Q8NEF3 446 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 RFFLQ8WZ73 363 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 FBRSL1Q9HCM7 1045 aaKnown RBP20.41■□□□□ 0.86
LIME1-205ENST00000480139 DNAJC17Q9NVM6 304 aaKnown RBP20.41■□□□□ 0.86
LIME1-205ENST00000480139 PLK2Q9NYY3 685 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 NDRG2Q9UN36 371 aaKnown RBP20.41■□□□□ 0.86
LIME1-205ENST00000480139 SLC27A6Q9Y2P4 619 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 MTF2Q9Y483 593 aaPredicted RBP20.41■□□□□ 0.86
LIME1-205ENST00000480139 PCDHA13Q9Y5I0 950 aa20.41■□□□□ 0.86
LIME1-205ENST00000480139 FAM86C2PA6NEL3 165 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 MYO1FO00160 1098 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 LRCH4O75427 683 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 CHRNB1P11230 501 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 GRIA2P42262 883 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 FBXO43Q4G163 708 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 GRAMD4Q6IC98 578 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 FBXL22Q6P050 247 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 SLFN11Q7Z7L1 901 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 KMT2EQ8IZD2 1858 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 ARFGAP1Q8N6T3 406 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 CCDC185Q8N715 623 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 NAT16Q8N8M0 369 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 ANP32BQ92688 251 aaKnown RBP20.4■□□□□ 0.86
LIME1-205ENST00000480139 BHMTQ93088 406 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 MYEOVQ96EZ4 313 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 OSBPL2Q9H1P3 480 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 ARHGEF4Q9NR80 690 aa20.4■□□□□ 0.86
LIME1-205ENST00000480139 IGLV3-10A0A075B6K4 115 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 TBL1XO60907 577 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 KAT7O95251 611 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 APODP05090 189 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 CISD3P0C7P0 127 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 DGKGP49619 791 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 RPS24P62847 133 aaKnown RBP20.39■□□□□ 0.85
LIME1-205ENST00000480139 SCYL2Q6P3W7 929 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 LRRC31Q6UY01 552 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 NUDT18Q6ZVK8 323 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 ZNF683Q8IZ20 524 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 TERB1Q8NA31 727 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 CCDC26Q8TAB7 109 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 SLC35G2Q8TBE7 412 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 IER2Q9BTL4 223 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 SIK2Q9H0K1 926 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 TMPRSS4Q9NRS4 437 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 DLGAP2Q9P1A6 1054 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 VANGL2Q9ULK5 521 aa20.39■□□□□ 0.85
LIME1-205ENST00000480139 DOCK4Q8N1I0 1966 aa20.38■□□□□ 0.85
LIME1-205ENST00000480139 A0A0A6YYK5 440 aaPredicted RBP20.38■□□□□ 0.85
LIME1-205ENST00000480139 A0A1B0GVM2 712 aa20.38■□□□□ 0.85
LIME1-205ENST00000480139 TCAF2A6NFQ2 919 aa20.38■□□□□ 0.85
LIME1-205ENST00000480139 DRGXA6NNA5 263 aa20.38■□□□□ 0.85
LIME1-205ENST00000480139 MAN1A1P33908 653 aa20.38■□□□□ 0.85
LIME1-205ENST00000480139 ARHGAP25P42331 645 aa20.38■□□□□ 0.85
LIME1-205ENST00000480139 HADHBP55084 474 aaKnown RBP20.38■□□□□ 0.85
LIME1-205ENST00000480139 KRT83P78385 493 aa20.38■□□□□ 0.85
LIME1-205ENST00000480139 EFHC2Q5JST6 749 aa20.38■□□□□ 0.85
LIME1-205ENST00000480139 PSTKQ8IV42 348 aaKnown RBP20.38■□□□□ 0.85
LIME1-205ENST00000480139 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.38■□□□□ 0.85
LIME1-205ENST00000480139 RPRD1AQ96P16 312 aaPredicted RBP20.38■□□□□ 0.85
LIME1-205ENST00000480139 OSGEPQ9NPF4 335 aa20.38■□□□□ 0.85
LIME1-205ENST00000480139 PPARGC1AQ9UBK2 798 aaKnown RBP20.38■□□□□ 0.85
LIME1-205ENST00000480139 OR12D3Q9UGF7 316 aa20.38■□□□□ 0.85
LIME1-205ENST00000480139 FZD10Q9ULW2 581 aa20.38■□□□□ 0.85
LIME1-205ENST00000480139 E9PAM4 449 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 PRPSAP2O60256 369 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 PROSCO94903 275 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 LUC7L3O95232 432 aaKnown RBP20.37■□□□□ 0.85
LIME1-205ENST00000480139 EGFP01133 1207 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 MIPP30301 263 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 TNFRSF4P43489 277 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 KDSRQ06136 332 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 MESP2Q0VG99 397 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 ARTNQ5T4W7 220 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 MANEALQ5VSG8 457 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 CHST9Q7L1S5 443 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms