RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 TPI1P60174 286 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 ITGA7Q13683 1181 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 BMPR2Q13873 1038 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 RNF43Q68DV7 783 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 OTOAQ7RTW8 1153 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 UNC5BQ8IZJ1 945 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 NPWQ8N729 165 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 RSPH1Q8WYR4 309 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 PLCD4Q9BRC7 762 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 RNF186Q9NXI6 227 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 NOD1Q9Y239 953 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.39□□□□□ -0.27
SEC13-216ENST00000479868 SHROOM3Q8TF72 1996 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 THSD7BQ9C0I4 1608 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 FAM159BA6NKW6 160 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 SNRPAP09012 282 aaKnown RBP13.39□□□□□ -0.27
SEC13-216ENST00000479868 SARNPP82979 210 aaKnown RBP13.39□□□□□ -0.27
SEC13-216ENST00000479868 BSPRYQ5W0U4 402 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 PM20D1Q6GTS8 502 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 CDHR3Q6ZTQ4 885 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 METTL23Q86XA0 190 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 SCAMP5Q8TAC9 235 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 PTPRN2Q92932 1015 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 PGBD4Q96DM1 585 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 OXNAD1Q96HP4 312 aaPredicted RBP13.39□□□□□ -0.27
SEC13-216ENST00000479868 FAM111AQ96PZ2 611 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 TKTL2Q9H0I9 626 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 WDCPQ9H6R7 721 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 RXFP1Q9HBX9 757 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 TTC3P53804 2025 aa13.39□□□□□ -0.27
SEC13-216ENST00000479868 COL4A4P53420 1690 aaPredicted RBP13.39□□□□□ -0.27
SEC13-216ENST00000479868 HMX2A2RU54 273 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 B4GALT3O60512 393 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 KRT37O76014 449 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 DHRS4L1P0CG22 281 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 ALADP13716 330 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 HNRNPH1P31943 449 aaKnown RBP13.38□□□□□ -0.27
SEC13-216ENST00000479868 CXCR3P49682 368 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 SESN2P58004 480 aaPredicted RBP13.38□□□□□ -0.27
SEC13-216ENST00000479868 CDK16Q00536 496 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 OVOS1Q6IE37 1185 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 CASC4Q6P4E1 433 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 LRRC8BQ6P9F7 803 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 ZNF598Q86UK7 904 aaKnown RBP13.38□□□□□ -0.27
SEC13-216ENST00000479868 TAC4Q86UU9 113 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 STAMBPL1Q96FJ0 436 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 VPS11Q9H270 941 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 DMAP1Q9NPF5 467 aaPredicted RBP13.38□□□□□ -0.27
SEC13-216ENST00000479868 EIF2B3Q9NR50 452 aaKnown RBP13.38□□□□□ -0.27
SEC13-216ENST00000479868 MOCS1Q9NZB8 636 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 OR12D3Q9UGF7 316 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 RFPL1O75677 317 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 MLNP12872 115 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 MGAT1P26572 445 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 HCAR3P49019 387 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 BNIP1Q12981 228 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 OLIG2Q13516 323 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 PARP6Q2NL67 630 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 ARL13BQ3SXY8 428 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 PID1Q7Z2X4 250 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 PCSK9Q8NBP7 692 aaKnown RBP13.38□□□□□ -0.27
SEC13-216ENST00000479868 DEPDC1BQ8WUY9 529 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 ARNTL2Q8WYA1 636 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 FERMT1Q9BQL6 677 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 GORASP1Q9BQQ3 440 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 RRN3Q9NYV6 651 aa13.38□□□□□ -0.27
SEC13-216ENST00000479868 SDR42E2A6NKP2 422 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 F9P00740 461 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 PTPN3P26045 913 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 NCALDP61601 193 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 SLC20A2Q08357 652 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 FAM26DQ5JW98 314 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 STEAP4Q687X5 459 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 GBP7Q8N8V2 638 aaPredicted RBP13.37□□□□□ -0.27
SEC13-216ENST00000479868 IRGQQ8WZA9 623 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 SRPK1Q96SB4 655 aaKnown RBP13.37□□□□□ -0.27
SEC13-216ENST00000479868 MANSC1Q9H8J5 431 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 IGSF9Q9P2J2 1179 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 SLC17A6Q9P2U8 582 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 DSEQ9UL01 958 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 PATJQ8NI35 1801 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 COPEO14579 308 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 LRIG2O94898 1065 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 PPIDQ08752 370 aaKnown RBP13.37□□□□□ -0.27
SEC13-216ENST00000479868 IFRD2Q12894 506 aaPredicted RBP13.37□□□□□ -0.27
SEC13-216ENST00000479868 MROH9Q5TGP6 573 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 RTN4RL1Q86UN2 441 aaPredicted RBP13.37□□□□□ -0.27
SEC13-216ENST00000479868 DQX1Q8TE96 717 aaKnown RBP13.37□□□□□ -0.27
SEC13-216ENST00000479868 C10orf82Q8WW14 230 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 TTC17Q96AE7 1141 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 SUSD3Q96L08 255 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 ECT2Q9H8V3 914 aa13.37□□□□□ -0.27
SEC13-216ENST00000479868 KLHL8Q9P2G9 620 aaPredicted RBP13.37□□□□□ -0.27
SEC13-216ENST00000479868 FRMPD3Q5JV73 1810 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 KRT38O76015 456 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 ALDH1A2O94788 518 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 EPHB2P29323 1055 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 PGFP49763 221 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 ACLYP53396 1101 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 LGSNQ5TDP6 509 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms