RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 ACO1P21399 889 aaKnown RBP6.96□□□□□ -1.3
VCP-205ENST00000479300 IL12RB1P42701 662 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 TUBP50607 506 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 TPMTP51580 245 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 COPAP53621 1224 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 FKBP3Q00688 224 aaKnown RBP6.96□□□□□ -1.3
VCP-205ENST00000479300 ORC1Q13415 861 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 PNOCQ13519 176 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 ENPP2Q13822 863 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 E2F5Q15329 346 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 SMAD1Q15797 465 aaKnown RBP6.96□□□□□ -1.3
VCP-205ENST00000479300 CCDC40Q4G0X9 1142 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 DCAF12L1Q5VU92 463 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 FBXO38Q6PIJ6 1188 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 LAYNQ6UX15 382 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 Q6ZNB5 142 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 TPGS1Q6ZTW0 290 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 HTR3DQ70Z44 454 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 GPRIN1Q7Z2K8 1008 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 METTL3Q86U44 580 aaKnown RBP6.96□□□□□ -1.3
VCP-205ENST00000479300 FUKQ8N0W3 1084 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 ARHGAP18Q8N392 663 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 PIP4K2CQ8TBX8 421 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 TAS1R2Q8TE23 839 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 FOXJ1Q92949 421 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 BHMTQ93088 406 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 XPO6Q96QU8 1125 aaKnown RBP6.96□□□□□ -1.3
VCP-205ENST00000479300 HNRNPABQ99729 332 aaKnown RBP6.96□□□□□ -1.3
VCP-205ENST00000479300 SMOQ99835 787 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 BBS2Q9BXC9 721 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 ZDHHC5Q9C0B5 715 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 SDCBP2Q9H190 292 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 MIR1-1HGQ9H1L0 117 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 GOLPH3LQ9H4A5 285 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 PRORYQ9H606 182 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 METTL14Q9HCE5 456 aaKnown RBP6.96□□□□□ -1.3
VCP-205ENST00000479300 ITM2CQ9NQX7 267 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 RAB20Q9NX57 234 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 PLK2Q9NYY3 685 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 WDR35Q9P2L0 1181 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 HESX1Q9UBX0 185 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 EIF2B4Q9UI10 523 aaKnown RBP6.96□□□□□ -1.3
VCP-205ENST00000479300 FBXO10Q9UK96 956 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 STRIP2Q9ULQ0 834 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.96□□□□□ -1.3
VCP-205ENST00000479300 NFE2L3Q9Y4A8 694 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 STON1Q9Y6Q2 735 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 SHROOM3Q8TF72 1996 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 CKAP5Q14008 2032 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 BICDL2A1A5D9 508 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 MEI4A8MW99 385 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 GFRA2O00451 464 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 MDM4O15151 490 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 ATXN7O15265 892 aaPredicted RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 BCAT2O15382 392 aaPredicted RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 SLC16A3O15427 465 aaKnown RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 TLR5O60602 858 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 GADD45BO75293 160 aaPredicted RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 FGFR1OPO95684 399 aaKnown RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 IGLV3-19P01714 112 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 KLKB1P03952 638 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 NUDT7P0C024 238 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 RARGP13631 454 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 GNSP15586 552 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 PRKCHP24723 683 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 MATKP42679 507 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 PRCPP42785 496 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 ASPAP45381 313 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 PLA2G4AP47712 749 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 CSNK1EP49674 416 aaKnown RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 LRRC63Q05C16 580 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 PPP3CAQ08209 521 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 INCA1Q0VD86 236 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 TPD52L1Q16890 204 aaPredicted RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 GEN1Q17RS7 908 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 KIF19Q2TAC6 998 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 ZNF394Q53GI3 561 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 WDR45BQ5MNZ6 344 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 C10orf120Q5SQS8 335 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 SYCP2LQ5T4T6 812 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 TMEM215Q68D42 235 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 DHRS13Q6UX07 377 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 NYAP1Q6ZVC0 841 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 RSRC2Q7L4I2 434 aaKnown RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 CACUL1Q86Y37 369 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 FMR1NBQ8N0W7 255 aaPredicted RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 ZNF843Q8N446 348 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 C12orf29Q8N999 325 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 CADM4Q8NFZ8 388 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 RHBDD1Q8TEB9 315 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 TMEM176AQ96HP8 235 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 C16orf45Q96MC5 204 aaPredicted RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 UBL7Q96S82 380 aaPredicted RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 ORAI3Q9BRQ5 295 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 DUSP16Q9BY84 665 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 DCLK3Q9C098 648 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 C6orf106Q9H6K1 298 aaPredicted RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 NMUR1Q9HB89 426 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 CSNK1G1Q9HCP0 422 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 PNPLA8Q9NP80 782 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms