RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 POLR3BQ9NW08 1133 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-215ENST00000478531 C2orf42Q9NWW7 574 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 STOML2Q9UJZ1 356 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 VANGL2Q9ULK5 521 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 PAXBP1Q9Y5B6 917 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 SNX10Q9Y5X0 201 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 CFAP54Q96N23 3096 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 EML5Q05BV3 1969 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 TCRBV5S1A1TA0A578 114 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 H0Y858 1186 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 AKR1B10O60218 316 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 DESP17661 470 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 PTPN9P43378 593 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 CXCR3P49682 368 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 SATB1Q01826 763 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 MAMLD1Q13495 774 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 CDH18Q13634 790 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 FBXO43Q4G163 708 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 BRMS1LQ5PSV4 323 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 RABGAP1LQ5R372 815 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 PPP1R15BQ5SWA1 713 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 ALKBH5Q6P6C2 394 aaKnown RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 TSSK4Q6SA08 328 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 NUDT18Q6ZVK8 323 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 ANKS1BQ7Z6G8 1248 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 MFN1Q8IWA4 741 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 FANCMQ8IYD8 2048 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 PHTF2Q8N3S3 785 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 SYNPOQ8N3V7 929 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 CCDC33Q8N5R6 958 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 ALLCQ8N6M5 410 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 ZNF513Q8N8E2 541 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 SPC24Q8NBT2 197 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 WFDC5Q8TCV5 224 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 AZIN2Q96A70 460 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 PGAP3Q96FM1 320 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 VCPIP1Q96JH7 1222 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 RPRD1AQ96P16 312 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 CHP1Q99653 195 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 TRIM7Q9C029 511 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 THAP2Q9H0W7 228 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 ISCUQ9H1K1 167 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 NHEJ1Q9H9Q4 299 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 ANLNQ9NQW6 1124 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 ABCB8Q9NUT2 735 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 SPTLC3Q9NUV7 552 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 ARHGEF38Q9NXL2 777 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 NYNRINQ9P2P1 1898 aaKnown RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 HS3ST4Q9Y661 456 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 SCINQ9Y6U3 715 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 SPAG17Q6Q759 2223 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 SDK1Q7Z5N4 2213 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 MUC22E2RYF6 1773 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 PRRT4C9JH25 899 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 H0Y626 953 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 I6L893 689 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 GFRA2O00451 464 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 KLF8O95600 359 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 MYBL1P10243 752 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 PSMA2P25787 234 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 IRAK1P51617 712 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 CCR3P51677 355 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 ZNF143P52747 638 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 HDAC4P56524 1084 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 OGDHQ02218 1023 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 CSTF1Q05048 431 aaKnown RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 AUHQ13825 339 aaKnown RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 SLC18A3Q16572 532 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 GEN1Q17RS7 908 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 EMC10Q5UCC4 262 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 PLEKHA7Q6IQ23 1121 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 FBXL22Q6P050 247 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 SCYL2Q6P3W7 929 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 CCDC117Q8IWD4 279 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 SPEM1Q8N4L4 309 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 CCDC185Q8N715 623 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 TC2NQ8N9U0 490 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 CCDC42Q96M95 316 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 HHIPQ96QV1 700 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 PRMT1Q99873 361 aaKnown RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 PACSIN1Q9BY11 444 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 CIPCQ9C0C6 399 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 FAM86C1Q9NVL1 165 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 BCCIPQ9P287 314 aaKnown RBP eCLIP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 RIF1Q5UIP0 2472 aaKnown RBP7.13□□□□□ -1.27
BRCA1-215ENST00000478531 PIEZO1Q92508 2521 aa7.13□□□□□ -1.27
BRCA1-215ENST00000478531 CKAP5Q14008 2032 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 DMXL1Q9Y485 3027 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 SSU72P8A0A1W2PR75 194 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 SRGAP2O75044 1071 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 LUC7L3O95232 432 aaKnown RBP7.12□□□□□ -1.27
BRCA1-215ENST00000478531 CISD3P0C7P0 127 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 HLA-FP30511 346 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 HOXC13P31276 330 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 CD70P32970 193 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 WASP42768 502 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 TNFRSF4P43489 277 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 CXCL12P48061 93 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 GALCP54803 685 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 TCF15Q12870 199 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms