RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 SEPT3Q9UH03 358 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 SMG5Q9UPR3 1016 aaKnown RBP12.35□□□□□ -0.43
PCCB-214ENST00000478469 DRG1Q9Y295 367 aaKnown RBP12.35□□□□□ -0.43
PCCB-214ENST00000478469 E2F5Q15329 346 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 ACBD5Q5T8D3 534 aaPredicted RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 SLC39A5Q6ZMH5 540 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 C4orf33Q8N1A6 199 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 SH2D3CQ8N5H7 860 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 C2orf15Q8WU43 125 aaKnown RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 PPM1EQ8WY54 764 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 EGFL8Q99944 293 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 UBE2OQ9C0C9 1292 aaKnown RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 SUDS3Q9H7L9 328 aaPredicted RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 C10orf88Q9H8K7 445 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 ANKZF1Q9H8Y5 726 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 GOLGA8QA0A0J9YX86 632 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 GOLGA8OA6NCC3 632 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 GOLGA8NF8WBI6 632 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 MSI1O43347 362 aaKnown RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 TTC4O95801 387 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 NDUFV1P49821 464 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 PDAP1Q13442 181 aaKnown RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 MRNIPQ6NTE8 343 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 NPNTQ6UXI9 565 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 B3GALT6Q96L58 329 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 TCF25Q9BQ70 676 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 RGS18Q9NS28 235 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 PIRO00625 290 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 STAU1O95793 577 aaKnown RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 RALBP11234 206 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 CSF2RAP15509 400 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 CDH17Q12864 832 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 TAF5Q15542 800 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 MAB21L3Q8N8X9 362 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 LPIN3Q9BQK8 851 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 TRIM55Q9BYV6 548 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 LRRC19Q9H756 370 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 CERS4Q9HA82 394 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 PTPRHQ9HD43 1115 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 PAGE1O75459 146 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 PYGLP06737 847 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 PECAM1P16284 738 aaPredicted RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 CST5P28325 142 aaPredicted RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 HSPA9P38646 679 aaKnown RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 SLC11A1P49279 550 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 ZNF697Q5TEC3 545 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 PTRHD1Q6GMV3 140 aaKnown RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 LRRC49Q8IUZ0 686 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 SMG8Q8ND04 991 aaKnown RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 LMO3Q8TAP4 145 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 MAML1Q92585 1016 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 DDX23Q9BUQ8 820 aaKnown RBP12.34□□□□□ -0.43
PCCB-214ENST00000478469 XYLT2Q9H1B5 865 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 CRLS1Q9UJA2 301 aa12.34□□□□□ -0.43
PCCB-214ENST00000478469 C2CD4BA6NLJ0 364 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 EIF3HO15372 352 aaKnown RBP eCLIP12.33□□□□□ -0.44
PCCB-214ENST00000478469 LIASO43766 372 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 MMP13P45452 471 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 C1QTNF8P60827 252 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 INCA1Q0VD86 236 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 FUKQ8N0W3 1084 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 LRRN4CLQ8ND94 238 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 BTN2A3PQ96KV6 586 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 APOL5Q9BWW9 433 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 VRTNQ9H8Y1 702 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 TSR3Q9UJK0 312 aaKnown RBP12.33□□□□□ -0.44
PCCB-214ENST00000478469 VPS9D1Q9Y2B5 631 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 EFR3BQ9Y2G0 817 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 RNASEH1O60930 286 aaKnown RBP12.33□□□□□ -0.44
PCCB-214ENST00000478469 ZSCAN5DPP0CG00 497 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 IFT88Q13099 833 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 MOGSQ13724 837 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 GTF2H3Q13889 308 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 DPYSL3Q14195 570 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 MROH9Q5TGP6 573 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 CLEC20AQ6ZU45 233 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 SMG7Q92540 1137 aaKnown RBP12.33□□□□□ -0.44
PCCB-214ENST00000478469 ELMO2Q96JJ3 720 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 ELAC2Q9BQ52 826 aaKnown RBP12.33□□□□□ -0.44
PCCB-214ENST00000478469 LATS2Q9NRM7 1088 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 PCYOX1Q9UHG3 505 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 A0A0A0MRY4 1105 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 YJEFN3A6XGL0 299 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 E7ENQ6 273 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 HAS3O00219 553 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 MDM4O15151 490 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 CRTAMO95727 393 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 FGD4Q96M96 766 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 SPATA13Q96N96 652 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 SERPINB12Q96P63 405 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 KLF6Q99612 283 aaPredicted RBP12.33□□□□□ -0.44
PCCB-214ENST00000478469 SEMA4AQ9H3S1 761 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 AFF4Q9UHB7 1163 aaKnown RBP12.33□□□□□ -0.44
PCCB-214ENST00000478469 FAM153AQ9UHL3 310 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 MYH7BA7E2Y1 1941 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 ADGRA2Q96PE1 1338 aa12.33□□□□□ -0.44
PCCB-214ENST00000478469 MTA2O94776 668 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 ATP5BP06576 529 aaKnown RBP12.32□□□□□ -0.44
PCCB-214ENST00000478469 H2AFXP16104 143 aaPredicted RBP12.32□□□□□ -0.44
PCCB-214ENST00000478469 PROZP22891 400 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms