RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 EDEM3Q9BZQ6 932 aa16.14■□□□□ 0.17
HMGA1-206ENST00000478214 CIPCQ9C0C6 399 aa16.14■□□□□ 0.17
HMGA1-206ENST00000478214 POLMQ9NP87 494 aaPredicted RBP16.14■□□□□ 0.17
HMGA1-206ENST00000478214 AIPL1Q9NZN9 384 aa16.14■□□□□ 0.17
HMGA1-206ENST00000478214 GGA2Q9UJY4 613 aa16.14■□□□□ 0.17
HMGA1-206ENST00000478214 FAM186AA6NE01 2351 aa16.14■□□□□ 0.17
HMGA1-206ENST00000478214 MYO18AQ92614 2054 aaKnown RBP16.14■□□□□ 0.17
HMGA1-206ENST00000478214 OTOGLQ3ZCN5 2332 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 A0A1W2PQF6 199 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 TYW5A2RUC4 315 aaKnown RBP16.13■□□□□ 0.17
HMGA1-206ENST00000478214 F5H5T6 163 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 PAGE1O75459 146 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 RPP40O75818 363 aaKnown RBP16.13■□□□□ 0.17
HMGA1-206ENST00000478214 ADCY5O95622 1261 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 PABPC1P11940 636 aaKnown RBP16.13■□□□□ 0.17
HMGA1-206ENST00000478214 TNFAIP3P21580 790 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 CD70P32970 193 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 GGCXP38435 758 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 CXCR3P49682 368 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 ATXN1P54253 815 aaKnown RBP16.13■□□□□ 0.17
HMGA1-206ENST00000478214 EIF4HQ15056 248 aaKnown RBP16.13■□□□□ 0.17
HMGA1-206ENST00000478214 FIGNQ5HY92 759 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 SDE2Q6IQ49 451 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 CEP68Q76N32 757 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 CHST9Q7L1S5 443 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 MON1BQ7L1V2 547 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 ARCQ7LC44 396 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 KIAA0907Q7Z7F0 614 aaPredicted RBP16.13■□□□□ 0.17
HMGA1-206ENST00000478214 RASSF3Q86WH2 238 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 CARNMT1Q8N4J0 409 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 RNF214Q8ND24 703 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 JOSD2Q8TAC2 188 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 WFIKKN2Q8TEU8 576 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 UCMAQ8WVF2 138 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 HMGB4Q8WW32 186 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 GAB3Q8WWW8 586 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 ERLEC1Q96DZ1 483 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 PGAP3Q96FM1 320 aaPredicted RBP16.13■□□□□ 0.17
HMGA1-206ENST00000478214 CFAP57Q96MR6 1250 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 GABRG3Q99928 467 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 ANLNQ9NQW6 1124 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 THAP10Q9P2Z0 257 aaPredicted RBP16.13■□□□□ 0.17
HMGA1-206ENST00000478214 FRYLO94915 3013 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 GVINP1Q7Z2Y8 2422 aa16.13■□□□□ 0.17
HMGA1-206ENST00000478214 TCRBV21S2A2A0A5A6 115 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 I6L893 689 aaPredicted RBP16.12■□□□□ 0.17
HMGA1-206ENST00000478214 TIMM44O43615 452 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 ALDH1A2O94788 518 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 F9P00740 461 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 CALB1P05937 261 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 IL12RB1P42701 662 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
HMGA1-206ENST00000478214 LMAN2Q12907 356 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 FSCBQ5H9T9 825 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 BRMS1LQ5PSV4 323 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 ACAD10Q6JQN1 1059 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 KIAA1211LQ6NV74 962 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 FBXL22Q6P050 247 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 SND1Q7KZF4 910 aaKnown RBP eCLIP16.12■□□□□ 0.17
HMGA1-206ENST00000478214 ZNF571Q7Z3V5 609 aaPredicted RBP16.12■□□□□ 0.17
HMGA1-206ENST00000478214 BNIPLQ7Z465 357 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 C14orf80Q86SX3 495 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 ADIPOR2Q86V24 386 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 CIR1Q86X95 450 aaPredicted RBP16.12■□□□□ 0.17
HMGA1-206ENST00000478214 FIBINQ8TAL6 211 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 RXFP2Q8WXD0 754 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 LMLNQ96KR4 655 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 NUP58Q9BVL2 599 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 XPO4Q9C0E2 1151 aaKnown RBP16.12■□□□□ 0.17
HMGA1-206ENST00000478214 TKTL2Q9H0I9 626 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 SIK2Q9H0K1 926 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 HAUS4Q9H6D7 363 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 WDCPQ9H6R7 721 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 CD248Q9HCU0 757 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 ARHGEF38Q9NXL2 777 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 TAS2R14Q9NYV8 317 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 RAB23Q9ULC3 237 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 INVSQ9Y283 1065 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 RAD54BQ9Y620 910 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 HS3ST4Q9Y661 456 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 STON1Q9Y6Q2 735 aa16.12■□□□□ 0.17
HMGA1-206ENST00000478214 A0A1W2PQJ5 194 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 C2CD4BA6NLJ0 364 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 DCLK1O15075 740 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 LUC7L3O95232 432 aaKnown RBP16.11■□□□□ 0.17
HMGA1-206ENST00000478214 KRT3P12035 628 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 SKILP12757 684 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 PDGFRAP16234 1089 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 PRKCIP41743 596 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 IRAK1P51617 712 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 GSCP56915 257 aaPredicted RBP16.11■□□□□ 0.17
HMGA1-206ENST00000478214 ATP11AP98196 1134 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 KLHL30Q0D2K2 578 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 CDH18Q13634 790 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 AUHQ13825 339 aaKnown RBP16.11■□□□□ 0.17
HMGA1-206ENST00000478214 ZNF234Q14588 700 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 C15orf59Q2T9L4 293 aaPredicted RBP16.11■□□□□ 0.17
HMGA1-206ENST00000478214 FUT11Q495W5 492 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 RAB6CQ53S08 254 aa16.11■□□□□ 0.17
HMGA1-206ENST00000478214 MBLAC2Q68D91 279 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms