RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ANKRD36BP1Q96IX9 119 aa7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 APOLD1Q96LR9 279 aa7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 SMOQ99835 787 aa7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 ZHX3Q9H4I2 956 aa7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 MTG2Q9H4K7 406 aa7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 CSNK1G1Q9HCP0 422 aa7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 BLOC1S4Q9NUP1 217 aa7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 SUN2Q9UH99 717 aa7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 AGO1Q9UL18 857 aaKnown RBP7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 TPX2Q9ULW0 747 aaKnown RBP7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 NOL7Q9UMY1 257 aaKnown RBP7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 SCML2Q9UQR0 700 aa7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 R3HCC1Q9Y3T6 440 aaKnown RBP7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 NBASA2RRP1 2371 aa7.67□□□□□ -1.18
SPTLC1-205ENST00000477888 A0A1W2PQH9 124 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 TNFSF15O95150 251 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 CYBBP04839 570 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 ITGA2BP08514 1039 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 DLDP09622 509 aaKnown RBP7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 THEGLP0DJG4 465 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 RARGP13631 454 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 FECHP22830 423 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 SFSWAPQ12872 951 aaKnown RBP7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 DHX8Q14562 1220 aaKnown RBP7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 ANKRD1Q15327 319 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 TGIF1Q15583 401 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 DUOXA2Q1HG44 320 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 WDR72Q3MJ13 1102 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 C10orf120Q5SQS8 335 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 NAPEPLDQ6IQ20 393 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 CHST9Q7L1S5 443 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 GPRIN1Q7Z2K8 1008 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 PTRH1Q86Y79 214 aaKnown RBP7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 FAM217AQ8IXS0 508 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 FUKQ8N0W3 1084 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 WDR36Q8NI36 951 aaKnown RBP7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 MAPK15Q8TD08 544 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 DDI1Q8WTU0 396 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 SMARCD1Q96GM5 515 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 MYO19Q96H55 970 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 CDK5RAP3Q96JB5 506 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 C8orf76Q96K31 380 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 CBWD1Q9BRT8 395 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 USP29Q9HBJ7 922 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 ACSL6Q9UKU0 697 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 FZD4Q9ULV1 537 aa7.66□□□□□ -1.18
SPTLC1-205ENST00000477888 VWA3AA6NCI4 1184 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 MID1O15344 667 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 FFAR2O15552 330 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 MAGEC1O60732 1142 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 TBCAO75347 108 aaKnown RBP7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 RNASEH2AO75792 299 aaKnown RBP7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 AP1G2O75843 785 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 TNNC2P02585 160 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 GOT1P17174 413 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 HOXD9P28356 352 aaPredicted RBP7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 CORO1AP31146 461 aaKnown RBP7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 ADPRHP54922 357 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 PPP2CBP62714 309 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 PPP2CAP67775 309 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 COG7P83436 770 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 EHHADHQ08426 723 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 CKAP5Q14008 2032 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 MORC3Q14149 939 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 NCAPHQ15003 741 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 CST6Q15828 149 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 C2CD3Q4AC94 2353 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 HS1BP3Q53T59 392 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 C9orf64Q5T6V5 341 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 L1TD1Q5T7N2 865 aaKnown RBP7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 TRAPPC11Q7Z392 1133 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 SCD5Q86SK9 330 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 DENND1CQ8IV53 801 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 IFI44Q8TCB0 444 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 WFIKKN2Q8TEU8 576 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 HTR3CQ8WXA8 447 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 MED10Q9BTT4 135 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 FUCA2Q9BTY2 467 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 DCLK3Q9C098 648 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 ADNPQ9H2P0 1102 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 CAAP1Q9H8G2 361 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 KRT82Q9NSB4 513 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 KLHL11Q9NVR0 708 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 NLGN3Q9NZ94 848 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 EXOC7Q9UPT5 735 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 PCDHGA7Q9Y5G6 932 aa7.65□□□□□ -1.18
SPTLC1-205ENST00000477888 LRBAP50851 2863 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 ATP8B3O60423 1300 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 HHLA1C9JL84 531 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 K7ESM1 405 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 SCAMP1O15126 338 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 SLC26A4O43511 780 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 SIN3BO75182 1162 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 PRPF6O94906 941 aaKnown RBP7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 STAU1O95793 577 aaKnown RBP7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 KRT18P05783 430 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms