RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 SLC4A11Q8NBS3 891 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 ZNF333Q96JL9 665 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 CDRT15Q96T59 188 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 LIN28AQ9H9Z2 209 aaKnown RBP10.04□□□□□ -0.8
CMC1-209ENST00000477739 SETD4Q9NVD3 440 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 DPP3Q9NY33 737 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 PAK5Q9P286 719 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 TAGLN3Q9UI15 199 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 TLK1Q9UKI8 766 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 CORO1CQ9ULV4 474 aaPredicted RBP10.04□□□□□ -0.8
CMC1-209ENST00000477739 SLC25A27O95847 323 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 GSTA2P09210 222 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 HNRNPLP14866 589 aaKnown RBP eCLIP10.03□□□□□ -0.81e-6■■■■■ 31.6
CMC1-209ENST00000477739 ASPAP45381 313 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 DLG1Q12959 904 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 PTP4A2Q12974 167 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 TARBP2Q15633 366 aaKnown RBP10.03□□□□□ -0.8
CMC1-209ENST00000477739 ERO1BQ86YB8 467 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 NAT16Q8N8M0 369 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 SLC2A14Q8TDB8 520 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 AFG1LQ8WV93 481 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 KHSRPQ92945 711 aaKnown RBP eCLIP10.03□□□□□ -0.85e-7■■■□□ 16.9
CMC1-209ENST00000477739 RNF157Q96PX1 679 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 DCUN1D5Q9BTE7 237 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 TXNRD2Q9NNW7 524 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 PRMT7Q9NVM4 692 aaPredicted RBP10.03□□□□□ -0.8
CMC1-209ENST00000477739 SYBUQ9NX95 663 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 TUBGCP4Q9UGJ1 667 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 PPP2R3BQ9Y5P8 575 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 TK2O00142 265 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 SMAPO00193 183 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 RNF103O00237 685 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 PRPF4O43172 522 aaKnown RBP eCLIP10.03□□□□□ -0.8
CMC1-209ENST00000477739 GAS2O43903 313 aaKnown RBP10.03□□□□□ -0.8
CMC1-209ENST00000477739 DLDP09622 509 aaKnown RBP10.03□□□□□ -0.8
CMC1-209ENST00000477739 HOXC6P09630 235 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 IQCF3P0C7M6 154 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 RALBP11234 206 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 MPSTP25325 297 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 LMO2P25791 158 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 IRX1P78414 480 aaPredicted RBP10.03□□□□□ -0.8
CMC1-209ENST00000477739 SLC25A11Q02978 314 aaKnown RBP10.03□□□□□ -0.8
CMC1-209ENST00000477739 ADIGQ0VDE8 80 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 CERCAMQ5T4B2 595 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 ARHGAP17Q68EM7 881 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 DPP9Q86TI2 863 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 LDB1Q86U70 411 aaPredicted RBP10.03□□□□□ -0.8
CMC1-209ENST00000477739 ANKRD13AQ8IZ07 590 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 ST13P4Q8IZP2 240 aaPredicted RBP10.03□□□□□ -0.8
CMC1-209ENST00000477739 SLC44A1Q8WWI5 657 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 INPP5DQ92835 1189 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 SLC45A3Q96JT2 553 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 CAAP1Q9H8G2 361 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 THEGQ9P2T0 379 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 PIN4Q9Y237 131 aaKnown RBP10.03□□□□□ -0.8
CMC1-209ENST00000477739 ADGRA2Q96PE1 1338 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 NEMP2A6NFY4 417 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 FOXD2O60548 495 aaPredicted RBP10.03□□□□□ -0.8
CMC1-209ENST00000477739 RPL10P27635 214 aaKnown RBP10.03□□□□□ -0.8
CMC1-209ENST00000477739 SLC12A2P55011 1212 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 RALGDSQ12967 914 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 CTBP1Q13363 440 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 USP10Q14694 798 aaKnown RBP10.03□□□□□ -0.8
CMC1-209ENST00000477739 EFHC1Q5JVL4 640 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 PRAMEF19Q5SWL8 479 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 NUP93Q8N1F7 819 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 SIX6OS1Q8N1H7 587 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 NAT14Q8WUY8 206 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 APBA2Q99767 749 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 CNPY3Q9BT09 278 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 XPNPEP3Q9NQH7 507 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 CNTRLQ7Z7A1 2325 aa10.03□□□□□ -0.8
CMC1-209ENST00000477739 CCDC189A1A4V9 331 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 TTC24A2A3L6 582 aaPredicted RBP10.02□□□□□ -0.81
CMC1-209ENST00000477739 TM9SF1O15321 606 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 JCHAINP01591 159 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 TGM2P21980 687 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 ARPP19P56211 112 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 ENPEPQ07075 957 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 GK3PQ14409 553 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 WASHC2DQ5SRD0 308 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 AMIGO2Q86SJ2 522 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 TMPRSS6Q8IU80 811 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 ZNF781Q8N8C0 355 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 DCBLD1Q8N8Z6 715 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 NDNQ99608 321 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 NPAS2Q99743 824 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 KLHL4Q9C0H6 718 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 GPC4O75487 556 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 SNUPNO95149 360 aaKnown RBP10.02□□□□□ -0.81
CMC1-209ENST00000477739 IL18RAPO95256 599 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 LYNP07948 512 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 MAP3K7CLP57077 242 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 TNFAIP2Q03169 654 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 CDC16Q13042 620 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 LAMB3Q13751 1172 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 FLOT2Q14254 428 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 C6orf52Q5T4I8 152 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 TRNP1Q6NT89 227 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 NKD2Q969F2 451 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms