RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SORCS3Q9UPU3 1222 aa15.86■□□□□ 0.13
SEC13-215ENST00000477547 HYOU1Q9Y4L1 999 aa15.86■□□□□ 0.13
SEC13-215ENST00000477547 HS3ST4Q9Y661 456 aa15.86■□□□□ 0.13
SEC13-215ENST00000477547 GOLGA6L7A0A1B0GV03 622 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 PRR23AA6NEV1 266 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 PROB1E7EW31 1015 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 F5H5T6 163 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 NARSO43776 548 aaKnown RBP15.85■□□□□ 0.13
SEC13-215ENST00000477547 ADH1CP00326 375 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 TACR2P21452 398 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 COMTP21964 271 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 IL1R2P27930 398 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 ADRA1BP35368 520 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 CHKAP35790 457 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 SLC1A1P43005 524 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 TNK2Q07912 1038 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 HADHQ16836 314 aaKnown RBP15.85■□□□□ 0.13
SEC13-215ENST00000477547 RFWD3Q6PCD5 774 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 CYP4V2Q6ZWL3 525 aaPredicted RBP15.85■□□□□ 0.13
SEC13-215ENST00000477547 IRF7Q92985 503 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 SIK2Q9H0K1 926 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 LINC00597Q9H2U6 94 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 FZD10Q9ULW2 581 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 DUSP12Q9UNI6 340 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 SNX10Q9Y5X0 201 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 DMDP11532 3685 aa15.85■□□□□ 0.13
SEC13-215ENST00000477547 RIF1Q5UIP0 2472 aaKnown RBP15.84■□□□□ 0.13
SEC13-215ENST00000477547 CHD5Q8TDI0 1954 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 TYW5A2RUC4 315 aaKnown RBP15.84■□□□□ 0.13
SEC13-215ENST00000477547 ARNTLO00327 626 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 TRDMT1O14717 391 aaKnown RBP15.84■□□□□ 0.13
SEC13-215ENST00000477547 PALMO75781 387 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 SRFP11831 508 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 TAS2R40P59535 323 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 LY6G5CQ5SRR4 150 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 TPGS1Q6ZTW0 290 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 LGI2Q8N0V4 545 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 RNF10Q8N5U6 811 aaKnown RBP15.84■□□□□ 0.13
SEC13-215ENST00000477547 LRRC57Q8N9N7 239 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 HJURPQ8NCD3 748 aaPredicted RBP15.84■□□□□ 0.13
SEC13-215ENST00000477547 CSGALNACT1Q8TDX6 532 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 HSPH1Q92598 858 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 DNASE1L2Q92874 299 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 BHMTQ93088 406 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 ALS2CR12Q96Q35 445 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 HAPLN3Q96S86 360 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 DHX35Q9H5Z1 703 aaKnown RBP15.84■□□□□ 0.13
SEC13-215ENST00000477547 SPHK2Q9NRA0 654 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.84■□□□□ 0.13
SEC13-215ENST00000477547 TRMT1Q9NXH9 659 aaKnown RBP15.84■□□□□ 0.13
SEC13-215ENST00000477547 GTSE1Q9NYZ3 720 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 VANGL2Q9ULK5 521 aa15.84■□□□□ 0.13
SEC13-215ENST00000477547 USP27XA6NNY8 438 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 NEDD8-MDP1E9PL57 170 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 GALR2O43603 387 aaPredicted RBP15.83■□□□□ 0.12
SEC13-215ENST00000477547 TSPAN3O60637 253 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 CYBBP04839 570 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 KRT7P08729 469 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 ADH5P11766 374 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 TNNT1P13805 278 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 SGSHP51688 502 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 RUNX3Q13761 415 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 AUHQ13825 339 aaKnown RBP15.83■□□□□ 0.12
SEC13-215ENST00000477547 DHCR24Q15392 516 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 ANO4Q32M45 955 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 ITPRIPL2Q3MIP1 535 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 KCNT1Q5JUK3 1230 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 RABGAP1LQ5R372 815 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 ERMARDQ5T6L9 678 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 ACBD5Q5T8D3 534 aaPredicted RBP15.83■□□□□ 0.12
SEC13-215ENST00000477547 TXNRD3NBQ6F5E7 133 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 SYCE1Q8N0S2 351 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 TTC8Q8TAM2 541 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 KIAA1524Q8TCG1 905 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 TEKT4Q8WW24 435 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 RPRD1AQ96P16 312 aaPredicted RBP15.83■□□□□ 0.12
SEC13-215ENST00000477547 PRMT1Q99873 361 aaKnown RBP15.83■□□□□ 0.12
SEC13-215ENST00000477547 BBS2Q9BXC9 721 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 ECT2Q9H8V3 914 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 KLHL11Q9NVR0 708 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 ALG6Q9Y672 507 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 FAM186AA6NE01 2351 aa15.83■□□□□ 0.12
SEC13-215ENST00000477547 NYNRINQ9P2P1 1898 aaKnown RBP15.82■□□□□ 0.12
SEC13-215ENST00000477547 GOLGA6L9A6NEM1 432 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 E9PAM4 449 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 GFRA2O00451 464 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 PSTPIP1O43586 416 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 FTCDO95954 541 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 KRT1P04264 644 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 RARAP10276 462 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 PFKPQ01813 784 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 CA9Q16790 459 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 MPPE1Q53F39 396 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 ZFYVE27Q5T4F4 411 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 TTC39BQ5VTQ0 682 aaPredicted RBP15.82■□□□□ 0.12
SEC13-215ENST00000477547 POLNQ7Z5Q5 900 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 CIR1Q86X95 450 aaPredicted RBP15.82■□□□□ 0.12
SEC13-215ENST00000477547 TMEM25Q86YD3 366 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 PSTKQ8IV42 348 aaKnown RBP15.82■□□□□ 0.12
SEC13-215ENST00000477547 REXO1L1PQ8IX06 675 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms