RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 STRA6Q9BX79 667 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 DUSP16Q9BY84 665 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 MUC3BQ9H195 1237 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 CDH9Q9ULB4 789 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 RNF103-CHMP3A0A140T963 221 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 DGKIO75912 1065 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 CYP2C18P33260 490 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 KCNJ2P63252 427 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 STX5Q13190 355 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 FASTKD3Q14CZ7 662 aaKnown RBP14.99□□□□□ -0.01
HDAC6-220ENST00000477528 CRELD2Q6UXH1 353 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-220ENST00000477528 ACMSDQ8TDX5 336 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 B3GNT5Q9BYG0 378 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 PRKD2Q9BZL6 878 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 NCKIPSDQ9NZQ3 722 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 OR12D3Q9UGF7 316 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 SLC30A1Q9Y6M5 507 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 TAF1P21675 1872 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 USP12O75317 370 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 PRKAA2P54646 552 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 ABCE1P61221 599 aaKnown RBP14.99□□□□□ -0.01
HDAC6-220ENST00000477528 SLC10A6Q3KNW5 377 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 RNF219Q5W0B1 726 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-220ENST00000477528 ZCCHC23Q6ZST2 131 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 EFHBQ8N7U6 833 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 BLOC1S5Q8TDH9 187 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 PPP1R13LQ8WUF5 828 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 CD101Q93033 1021 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 SERPINB11Q96P15 392 aa14.99□□□□□ -0.01
HDAC6-220ENST00000477528 TPP1O14773 563 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 LGR5O75473 907 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 SRP72O76094 671 aaKnown RBP14.98□□□□□ -0.01
HDAC6-220ENST00000477528 CD48P09326 243 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 IL10P22301 178 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 BDNFP23560 247 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 SERPINB5P36952 375 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 SLC11A2P49281 568 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 AP1ARQ63HQ0 302 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 SLC44A1Q8WWI5 657 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 FBXO44Q9H4M3 255 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 TMEM51Q9NW97 253 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 ARMCX1Q9P291 453 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 RBPJLQ9UBG7 517 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 ARAP2Q8WZ64 1704 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 F5H5T6 163 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 C2CD2LO14523 706 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 TCEA3O75764 348 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 CFHP08603 1231 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 RBP1P09455 135 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 CD151P48509 253 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 SLC25A52Q3SY17 297 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 FNBP1LQ5T0N5 605 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 OTOAQ7RTW8 1153 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 LGMNQ99538 433 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 CINPQ9BW66 212 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-220ENST00000477528 IL22Q9GZX6 179 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 NT5MQ9NPB1 228 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 VPS9D1Q9Y2B5 631 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 ANKRD6Q9Y2G4 727 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 SMIM28A0A1B0GU29 152 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 BCLAF3A2AJT9 711 aaKnown RBP14.98□□□□□ -0.01
HDAC6-220ENST00000477528 SUPT3HB4E1H0 165 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 E9PBE3 544 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 KLHL41O60662 606 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 SUPT3HO75486 399 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 ATG7O95352 703 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 ERVK-10P10266 1014 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 TUBP50607 506 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 SCNN1GP51170 649 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 MRPS6P82932 125 aaKnown RBP14.98□□□□□ -0.01
HDAC6-220ENST00000477528 FLOT2Q14254 428 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 C1orf220Q5T0J3 134 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 OR52K1Q8NGK4 314 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 CERS2Q96G23 380 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 NAF1Q96HR8 494 aaKnown RBP14.98□□□□□ -0.01
HDAC6-220ENST00000477528 EFCAB1Q9HAE3 211 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 MYO5AQ9Y4I1 1855 aaKnown RBP14.98□□□□□ -0.01
HDAC6-220ENST00000477528 C2CD4BA6NLJ0 364 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 E7ENQ6 273 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 H7C4K7 107 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 MDM4O15151 490 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 RHOBTB1O94844 696 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 RENBPP51606 427 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 RAD51Q06609 339 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 PRKAA1Q13131 559 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 MARC1Q5VT66 337 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 ZNF280DQ6N043 979 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 PMF1Q6P1K2 205 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 B3GNT9Q6UX72 402 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 RCOR3Q9P2K3 495 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-220ENST00000477528 SOX13Q9UN79 622 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 C15orf41Q9Y2V0 281 aa14.98□□□□□ -0.01
HDAC6-220ENST00000477528 FKBP6O75344 327 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 DDHD2O94830 711 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 NCALDP61601 193 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 CRADDP78560 199 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 INPP5AQ14642 412 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 ADGRD1Q6QNK2 874 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 SLC26A9Q7LBE3 791 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 ANKS1BQ7Z6G8 1248 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms