RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 MRGPRX3Q96LB0 322 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 ELF4Q99607 663 aaPredicted RBP10.2□□□□□ -0.78
COL4A5-204ENST00000477429 DUSP16Q9BY84 665 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 BTBD1Q9H0C5 482 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 KCTD10Q9H3F6 313 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 CLIC5Q9NZA1 410 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 MARCH2Q9P0N8 246 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 TFIP11Q9UBB9 837 aaKnown RBP10.2□□□□□ -0.78
COL4A5-204ENST00000477429 SFMBT1Q9UHJ3 866 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 INTS6Q9UL03 887 aaKnown RBP10.2□□□□□ -0.78
COL4A5-204ENST00000477429 MORC2Q9Y6X9 1032 aaPredicted RBP10.2□□□□□ -0.78
COL4A5-204ENST00000477429 A0A1W2PPC4 97 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 MSI1O43347 362 aaKnown RBP10.19□□□□□ -0.78
COL4A5-204ENST00000477429 SIN3BO75182 1162 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 RFPL3O75679 317 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 LDOC1O95751 146 aaPredicted RBP10.19□□□□□ -0.78
COL4A5-204ENST00000477429 TRIM49P0CI25 452 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 TRIM49CP0CI26 452 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 SLC6A4P31645 630 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 CHKAP35790 457 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 CTSOP43234 321 aaPredicted RBP10.19□□□□□ -0.78
COL4A5-204ENST00000477429 NASPP49321 788 aaPredicted RBP10.19□□□□□ -0.78
COL4A5-204ENST00000477429 NUMBP49757 651 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 YWHAGP61981 247 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL4A5-204ENST00000477429 COG7P83436 770 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 EIF4HQ15056 248 aaKnown RBP10.19□□□□□ -0.78
COL4A5-204ENST00000477429 TEAD4Q15561 434 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 SGSM1Q2NKQ1 1148 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 RAB41Q5JT25 222 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 MBLAC2Q68D91 279 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 RFWD3Q6PCD5 774 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 MMS22LQ6ZRQ5 1243 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 PIGZQ86VD9 579 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 FMNL3Q8IVF7 1028 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 SNIP1Q8TAD8 396 aaKnown RBP10.19□□□□□ -0.78
COL4A5-204ENST00000477429 TAS1R2Q8TE23 839 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 SEMA4DQ92854 862 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 NAF1Q96HR8 494 aaKnown RBP10.19□□□□□ -0.78
COL4A5-204ENST00000477429 NEUROG2Q9H2A3 272 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 PABPC3Q9H361 631 aaKnown RBP10.19□□□□□ -0.78
COL4A5-204ENST00000477429 PNPLA8Q9NP80 782 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 ANKMY1Q9P2S6 941 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 GGA2Q9UJY4 613 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.19□□□□□ -0.78
COL4A5-204ENST00000477429 PCDHB1Q9Y5F3 818 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 PCDHGA1Q9Y5H4 931 aa10.19□□□□□ -0.78
COL4A5-204ENST00000477429 UBE4BO95155 1302 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 A0A1W2PP55 124 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 E9PAM4 449 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 MID1O15344 667 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 RALAP11233 206 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 PABPC1P11940 636 aaKnown RBP10.18□□□□□ -0.78
COL4A5-204ENST00000477429 GP1BBP13224 206 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 MYF5P13349 255 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 EPHA8P29322 1005 aaPredicted RBP10.18□□□□□ -0.78
COL4A5-204ENST00000477429 PIK3CAP42336 1068 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 AFMP43652 599 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 GCLMP48507 274 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 BCAT1P54687 386 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 PPP2CBP62714 309 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 RACK1P63244 317 aaKnown RBP10.18□□□□□ -0.78
COL4A5-204ENST00000477429 PPP2CAP67775 309 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 CXADRP78310 365 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 INSM1Q01101 510 aaPredicted RBP10.18□□□□□ -0.78
COL4A5-204ENST00000477429 C6orf118Q5T5N4 469 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 SFMBT2Q5VUG0 894 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 NADSYN1Q6IA69 706 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 GPR155Q7Z3F1 870 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 AADATQ8N5Z0 425 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.18□□□□□ -0.78
COL4A5-204ENST00000477429 SLC4A11Q8NBS3 891 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 EDEM1Q92611 657 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 PRICKLE1Q96MT3 831 aaPredicted RBP10.18□□□□□ -0.78
COL4A5-204ENST00000477429 NT5C1AQ9BXI3 368 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 BACH2Q9BYV9 841 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 SLC2A11Q9BYW1 496 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 ULBP1Q9BZM6 244 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 DCLK3Q9C098 648 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 RSPH9Q9H1X1 276 aaPredicted RBP10.18□□□□□ -0.78
COL4A5-204ENST00000477429 CPNE5Q9HCH3 593 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 FBXL12Q9NXK8 326 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 STOML2Q9UJZ1 356 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 CA5BQ9Y2D0 317 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 ZNF510Q9Y2H8 683 aa10.18□□□□□ -0.78
COL4A5-204ENST00000477429 A0A1W2PNU3 283 aaPredicted RBP10.17□□□□□ -0.78
COL4A5-204ENST00000477429 YJEFN3A6XGL0 299 aa10.17□□□□□ -0.78
COL4A5-204ENST00000477429 TTC34A8MYJ7 566 aa10.17□□□□□ -0.78
COL4A5-204ENST00000477429 E7ENQ6 273 aa10.17□□□□□ -0.78
COL4A5-204ENST00000477429 TRIM38O00635 465 aa10.17□□□□□ -0.78
COL4A5-204ENST00000477429 POLR2DO15514 142 aaKnown RBP10.17□□□□□ -0.78
COL4A5-204ENST00000477429 TIMM44O43615 452 aa10.17□□□□□ -0.78
COL4A5-204ENST00000477429 SDC3O75056 442 aa10.17□□□□□ -0.78
COL4A5-204ENST00000477429 DNTTP04053 509 aa10.17□□□□□ -0.78
COL4A5-204ENST00000477429 NR3C1P04150 777 aa10.17□□□□□ -0.78
COL4A5-204ENST00000477429 CYBBP04839 570 aa10.17□□□□□ -0.78
COL4A5-204ENST00000477429 ITGAVP06756 1048 aa10.17□□□□□ -0.78
COL4A5-204ENST00000477429 DLDP09622 509 aaKnown RBP10.17□□□□□ -0.78
COL4A5-204ENST00000477429 VAV1P15498 845 aa10.17□□□□□ -0.78
COL4A5-204ENST00000477429 TKTL1P51854 596 aa10.17□□□□□ -0.78
COL4A5-204ENST00000477429 RAD23BP54727 409 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms