RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 TIMM44O43615 452 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 ACSL4O60488 711 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 FSBPO95073 299 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 IGLV3-19P01714 112 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 KRT5P13647 590 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 OXTRP30559 389 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 CTSOP43234 321 aaPredicted RBP12.12□□□□□ -0.47
VARS2-208ENST00000477052 ZNF132P52740 706 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 PITX1P78337 314 aaPredicted RBP12.12□□□□□ -0.47
VARS2-208ENST00000477052 KCNH2Q12809 1159 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 STIM1Q13586 685 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 HLA-BQ31612 363 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 FSCBQ5H9T9 825 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 KCNT1Q5JUK3 1230 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 KIAA0907Q7Z7F0 614 aaPredicted RBP12.12□□□□□ -0.47
VARS2-208ENST00000477052 SLCO6A1Q86UG4 719 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 CARNMT1Q8N4J0 409 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 EHBP1Q8NDI1 1231 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 CADM4Q8NFZ8 388 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 C1orf216Q8TAB5 229 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 DQX1Q8TE96 717 aaKnown RBP12.12□□□□□ -0.47
VARS2-208ENST00000477052 FAM149B1Q96BN6 582 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 LMLNQ96KR4 655 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 FCRL2Q96LA5 508 aaPredicted RBP12.12□□□□□ -0.47
VARS2-208ENST00000477052 CEP63Q96MT8 703 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 INTS2Q9H0H0 1204 aaKnown RBP12.12□□□□□ -0.47
VARS2-208ENST00000477052 TJP2Q9UDY2 1190 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 CYTH4Q9UIA0 394 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 INTS6Q9UL03 887 aaKnown RBP12.12□□□□□ -0.47
VARS2-208ENST00000477052 BTBD3Q9Y2F9 522 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 MSRB2Q9Y3D2 182 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 NEUROG3Q9Y4Z2 214 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 PCDHB9Q9Y5E1 797 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 KNL1Q8NG31 2342 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 FAM47DPA6NHR8 397 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 DLDP09622 509 aaKnown RBP12.11□□□□□ -0.47
VARS2-208ENST00000477052 FTH1P19P0C7X4 201 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 POLR2EP19388 210 aaKnown RBP12.11□□□□□ -0.47
VARS2-208ENST00000477052 CSKP41240 450 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 SLC11A2P49281 568 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 IL9RQ01113 521 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 TAF5Q15542 800 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 KIF19Q2TAC6 998 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 RAB44Q7Z6P3 723 aaPredicted RBP12.11□□□□□ -0.47
VARS2-208ENST00000477052 TAC4Q86UU9 113 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 CIR1Q86X95 450 aaPredicted RBP12.11□□□□□ -0.47
VARS2-208ENST00000477052 MFN1Q8IWA4 741 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 TRIM59Q8IWR1 403 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 DHX40Q8IX18 779 aaKnown RBP12.11□□□□□ -0.47
VARS2-208ENST00000477052 AHI1Q8N157 1196 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 SCML4Q8N228 414 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.11□□□□□ -0.47
VARS2-208ENST00000477052 GANCQ8TET4 914 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 WFIKKN2Q8TEU8 576 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 IRGQQ8WZA9 623 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 MYO19Q96H55 970 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 TIGD1Q96MW7 591 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 CRACR2AQ9BSW2 395 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 SRRTQ9BXP5 876 aaKnown RBP12.11□□□□□ -0.47
VARS2-208ENST00000477052 SERGEFQ9UGK8 458 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.11□□□□□ -0.47
VARS2-208ENST00000477052 SNX11Q9Y5W9 270 aa12.11□□□□□ -0.47
VARS2-208ENST00000477052 TTC34A8MYJ7 566 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 TAF4O00268 1085 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 CBFA2T3O75081 653 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 SIN3BO75182 1162 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 LETM1O95202 739 aaPredicted RBP12.1□□□□□ -0.47
VARS2-208ENST00000477052 SEMA4FO95754 770 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 LATS1O95835 1130 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 HOXB3P14651 431 aaPredicted RBP12.1□□□□□ -0.47
VARS2-208ENST00000477052 MATKP42679 507 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 GPD2P43304 727 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 SLC14A1Q13336 389 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 MORC3Q14149 939 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 CCDC157Q569K6 752 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 DCAF6Q58WW2 860 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 ZC3H12AQ5D1E8 599 aaKnown RBP12.1□□□□□ -0.47
VARS2-208ENST00000477052 PRAMEF14Q5SWL7 426 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 RAP1GAP2Q684P5 730 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 CREBRFQ8IUR6 639 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 UNC45BQ8IWX7 931 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 APCDD1Q8J025 514 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 LGI2Q8N0V4 545 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 GOLGA1Q92805 767 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 BIRC7Q96CA5 298 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 MRGPRX3Q96LB0 322 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 GTPBP4Q9BZE4 634 aaKnown RBP12.1□□□□□ -0.47
VARS2-208ENST00000477052 TM9SF3Q9HD45 589 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 UBE2TQ9NPD8 197 aaPredicted RBP12.1□□□□□ -0.47
VARS2-208ENST00000477052 TM7SF3Q9NS93 570 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 HOOK1Q9UJC3 728 aaKnown RBP12.1□□□□□ -0.47
VARS2-208ENST00000477052 PCOLCE2Q9UKZ9 415 aa12.1□□□□□ -0.47
VARS2-208ENST00000477052 TMEM131Q92545 1883 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 SYNJ2BP-COX16A0A087WUM0 186 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 E5RJQ4 531 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 PMM2O15305 246 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 MID1O15344 667 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 PAPSS1O43252 624 aaPredicted RBP12.09□□□□□ -0.47
VARS2-208ENST00000477052 DNTTP04053 509 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 ATP5BP06576 529 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms