RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 FRYLO94915 3013 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 NUP205Q92621 2012 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 SYNJ2BP-COX16A0A087WUM0 186 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 HEPACAM2A8MVW5 462 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 STC2O76061 302 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 TCF3P15923 654 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 GBP1P32455 592 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 KPNA1P52294 538 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-211ENST00000476994 MLLT6P55198 1093 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-211ENST00000476994 NAP1L1P55209 391 aaKnown RBP18.29■□□□□ 0.52
SREBF1-211ENST00000476994 TBX4P57082 545 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 USP4Q13107 963 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 ZC3H12AQ5D1E8 599 aaKnown RBP18.29■□□□□ 0.52
SREBF1-211ENST00000476994 FAM131BQ86XD5 332 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 CCDC185Q8N715 623 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 TRIM58Q8NG06 486 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 USP13Q92995 863 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-211ENST00000476994 NTAN1Q96AB6 310 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 NCAPGQ9BPX3 1015 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 SMG9Q9H0W8 520 aaKnown RBP18.29■□□□□ 0.52
SREBF1-211ENST00000476994 TMPRSS4Q9NRS4 437 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 COX16Q9P0S2 106 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 RAB23Q9ULC3 237 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 USP18Q9UMW8 372 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 CCL26Q9Y258 94 aa18.29■□□□□ 0.52
SREBF1-211ENST00000476994 CHADO15335 359 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 RNF8O76064 485 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 FTCDO95954 541 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 KLKB1P03952 638 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 CKMP06732 381 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 MARCKSL1P49006 195 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 CCR3P51677 355 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 COG7P83436 770 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 SCAPQ12770 1279 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 MTAPQ13126 283 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 LRRC32Q14392 662 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 PUM1Q14671 1186 aaKnown RBP eCLIP18.28■□□□□ 0.528e-10■□□□□ 10.5
SREBF1-211ENST00000476994 BRMS1LQ5PSV4 323 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 Q6ZNB5 142 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 ARID3BQ8IVW6 561 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-211ENST00000476994 SYCE1Q8N0S2 351 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 SLC35F6Q8N357 371 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 SUMF1Q8NBK3 374 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 ZBTB44Q8NCP5 570 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 PLD4Q96BZ4 506 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 RSPRY1Q96DX4 576 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 CHRDQ9H2X0 955 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 C8orf33Q9H7E9 229 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-211ENST00000476994 LMAN1LQ9HAT1 526 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 TMEM51Q9NW97 253 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 SMPD4Q9NXE4 827 aa18.28■□□□□ 0.52
SREBF1-211ENST00000476994 RALGAPA1Q6GYQ0 2036 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 DDX3YO15523 660 aaKnown RBP18.27■□□□□ 0.52
SREBF1-211ENST00000476994 KIF5CO60282 957 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 SDHBP21912 280 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 CTNNA2P26232 953 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 CTNNA1P35221 906 aaKnown RBP18.27■□□□□ 0.52
SREBF1-211ENST00000476994 ADRA1BP35368 520 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 ZNF77Q15935 545 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 ZNF569Q5MCW4 686 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 MEI1Q5TIA1 1274 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 LRRC38Q5VT99 294 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 DGLUCYQ7Z3D6 616 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 KRT35Q92764 455 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 HES6Q96HZ4 224 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 LRRC3BQ96PB8 259 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 ALS2CR12Q96Q35 445 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 WDR24Q96S15 920 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 SNRNP25Q9BV90 132 aaKnown RBP18.27■□□□□ 0.52
SREBF1-211ENST00000476994 TLR10Q9BXR5 811 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 MAGEB5Q9BZ81 275 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 NACA2Q9H009 215 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 PRMT8Q9NR22 394 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-211ENST00000476994 TDP1Q9NUW8 608 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.27■□□□□ 0.521e-6■■■■□ 25.1
SREBF1-211ENST00000476994 PCSK1NQ9UHG2 260 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 XPO7Q9UIA9 1087 aaKnown RBP18.27■□□□□ 0.52
SREBF1-211ENST00000476994 GMEB2Q9UKD1 530 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 FZD10Q9ULW2 581 aa18.27■□□□□ 0.52
SREBF1-211ENST00000476994 DCHS1Q96JQ0 3298 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 LEFTY2O00292 366 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 PSTPIP1O43586 416 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 SPOPO43791 374 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 HMBSP08397 361 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 CCR1P32246 355 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 AVPR1AP37288 418 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 PEX5P50542 639 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 ARSEP51690 589 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 CA9Q16790 459 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 ATP13A4Q4VNC1 1196 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 TSSK4Q6SA08 328 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 MAMSTRQ6ZN01 415 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 PEX26Q7Z412 305 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 POLNQ7Z5Q5 900 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 FAM71BQ8TC56 605 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 TEKT4Q8WW24 435 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 TKTL2Q9H0I9 626 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 WDCPQ9H6R7 721 aa18.26■□□□□ 0.51
SREBF1-211ENST00000476994 THG1LQ9NWX6 298 aaKnown RBP18.26■□□□□ 0.51
SREBF1-211ENST00000476994 OBP2AQ9NY56 170 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms