RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 SYNCRIPO60506 623 aaKnown RBP16.81■□□□□ 0.28
COL1A1-205ENST00000476387 HSF2BPO75031 334 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 APOEP02649 317 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 CFIP05156 583 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 FYNP06241 537 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 CEACAM1P13688 526 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 ZNF18P17022 549 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 ENGP17813 658 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 IL12RB1P42701 662 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 KLK7P49862 253 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 UBXN1Q04323 297 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 ZNF234Q14588 700 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 SYCP1Q15431 976 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 EFHC1Q5JVL4 640 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 SH3PXD2AQ5TCZ1 1133 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 TAF3Q5VWG9 929 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 OR6B2Q6IFH4 312 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 KIAA1324Q6UXG2 1013 aaKnown RBP16.81■□□□□ 0.28
COL1A1-205ENST00000476387 TAC4Q86UU9 113 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 WDTC1Q8N5D0 677 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 NEK11Q8NG66 645 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 ADAM32Q8TC27 787 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 WFIKKN2Q8TEU8 576 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 FOXJ1Q92949 421 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 ZNF419Q96HQ0 510 aaPredicted RBP16.81■□□□□ 0.28
COL1A1-205ENST00000476387 SPAG5Q96R06 1193 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 DDX50Q9BQ39 737 aaKnown RBP16.81■□□□□ 0.28
COL1A1-205ENST00000476387 SLC6A17Q9H1V8 727 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 PRDM16Q9HAZ2 1276 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 CAPN10Q9HC96 672 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 ASNSD1Q9NWL6 643 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 USP36Q9P275 1121 aaKnown RBP16.81■□□□□ 0.28
COL1A1-205ENST00000476387 CLEC4EQ9ULY5 219 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 TLR6Q9Y2C9 796 aa16.81■□□□□ 0.28
COL1A1-205ENST00000476387 CACNA1EQ15878 2313 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 TYW5A2RUC4 315 aaKnown RBP16.8■□□□□ 0.28
COL1A1-205ENST00000476387 SMTNL1A8MU46 457 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 TSPAN3O60637 253 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 NDUFS2O75306 463 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 GLI1P08151 1106 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 CD6P30203 668 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 GFPT1Q06210 699 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-205ENST00000476387 NCAPHQ15003 741 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 KLHL40Q2TBA0 621 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 PTPN20Q4JDL3 420 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 DCAF6Q58WW2 860 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 MPP7Q5T2T1 576 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 SYCP2LQ5T4T6 812 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 FAM183BPQ6ZVS7 135 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 SLC41A1Q8IVJ1 513 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 MSANTD4Q8NCY6 345 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 EPS8L1Q8TE68 723 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 ERLEC1Q96DZ1 483 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 TMA16Q96EY4 203 aaKnown RBP16.8■□□□□ 0.28
COL1A1-205ENST00000476387 HSPA12BQ96MM6 686 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 BPIFA3Q9BQP9 254 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 CIPCQ9C0C6 399 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 MKRN2Q9H000 416 aaKnown RBP16.8■□□□□ 0.28
COL1A1-205ENST00000476387 FAM204AQ9H8W3 233 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 NLRC4Q9NPP4 1024 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 ITM2CQ9NQX7 267 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 SIK3Q9Y2K2 1263 aa16.8■□□□□ 0.28
COL1A1-205ENST00000476387 CKAP5Q14008 2032 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 UPK3BL1B0FP48 263 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 UPK3BL2E5RIL1 263 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 IRAK2O43187 625 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 ACSL4O60488 711 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 GFPT2O94808 682 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 LSM8O95777 96 aaKnown RBP16.79■□□□□ 0.28
COL1A1-205ENST00000476387 TRUB2O95900 331 aaKnown RBP16.79■□□□□ 0.28
COL1A1-205ENST00000476387 MOCS2O96007 188 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-205ENST00000476387 IGLV3-19P01714 112 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 ERBB2P04626 1255 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 CDK17Q00537 523 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 ARID5AQ03989 594 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 UAP1L1Q3KQV9 507 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 SYPL2Q5VXT5 272 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 TMEM215Q68D42 235 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 NOP9Q86U38 636 aaKnown RBP16.79■□□□□ 0.28
COL1A1-205ENST00000476387 ZDHHC17Q8IUH5 632 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 DEFB119Q8N690 84 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.79■□□□□ 0.28
COL1A1-205ENST00000476387 AZIN2Q96A70 460 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 FCRL2Q96LA5 508 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-205ENST00000476387 SUSD2Q9UGT4 822 aa16.79■□□□□ 0.28
COL1A1-205ENST00000476387 PCNX2A6NKB5 2137 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 USP24Q9UPU5 2620 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 GIPC1O14908 333 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 DAB1O75553 588 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 GRAP2O75791 330 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 ATP1A3P13637 1013 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 PRKCHP24723 683 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 HLA-FP30511 346 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 OXTRP30559 389 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 CDH5P33151 784 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-205ENST00000476387 SOX5P35711 763 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 STAT1P42224 750 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 MAPK8P45983 427 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 ZNF165P49910 485 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 ATXN3P54252 364 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms