RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 WDTC1Q8N5D0 677 aa4.52□□□□□ -1.69
VPS13D-207ENST00000476169 GOT1L1Q8NHS2 421 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-207ENST00000476169 GABPB2Q8TAK5 448 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-207ENST00000476169 NACC2Q96BF6 587 aa4.52□□□□□ -1.69
VPS13D-207ENST00000476169 TBC1D31Q96DN5 1066 aa4.52□□□□□ -1.69
VPS13D-207ENST00000476169 SAAL1Q96ER3 474 aa4.52□□□□□ -1.69
VPS13D-207ENST00000476169 CCDC34Q96HJ3 373 aa4.52□□□□□ -1.69
VPS13D-207ENST00000476169 GPR20Q99678 358 aa4.52□□□□□ -1.69
VPS13D-207ENST00000476169 PHF7Q9BWX1 381 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-207ENST00000476169 ALOXE3Q9BYJ1 711 aa4.52□□□□□ -1.69
VPS13D-207ENST00000476169 TAOK3Q9H2K8 898 aa4.52□□□□□ -1.69
VPS13D-207ENST00000476169 MUC13Q9H3R2 512 aa4.52□□□□□ -1.69
VPS13D-207ENST00000476169 ZCCHC4Q9H5U6 513 aa4.52□□□□□ -1.69
VPS13D-207ENST00000476169 GALNT9Q9HCQ5 603 aa4.52□□□□□ -1.69
VPS13D-207ENST00000476169 MRPL15Q9P015 296 aaKnown RBP4.52□□□□□ -1.69
VPS13D-207ENST00000476169 ZNF70Q9UC06 446 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-207ENST00000476169 SARDHQ9UL12 918 aa4.52□□□□□ -1.69
VPS13D-207ENST00000476169 PASKQ96RG2 1323 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 TRGV11A0A075B6L2 103 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 A0A1W2PQ09 198 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 KRTAP23-1A1A580 65 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 GAGE12BA1L429 117 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 GAGE12HA6NDE8 117 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 NPIPB15A6NHN6 443 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 AGAP5A6NIR3 686 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 SLC38A8A6NNN8 435 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 TMEM232C9JQI7 657 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 SH2B2O14492 632 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 PRICKLE3O43900 615 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 NCR1O76036 304 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 SLU7O95391 586 aaKnown RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 PGM3O95394 542 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 SCG2P13521 617 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 ALADP13716 330 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 SAT1P21673 171 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 DRD1P21728 446 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 THBS4P35443 961 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 BSGP35613 385 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 PSMB10P40306 273 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 PIK3CAP42336 1068 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 GPD2P43304 727 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 LMAN1P49257 510 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 VAV2P52735 878 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 FAM189BP81408 668 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 TIAL1Q01085 375 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 GOLGA8DPQ0D2H9 430 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 AIMP1Q12904 312 aaKnown RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 EIF2B5Q13144 721 aaKnown RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 COG2Q14746 738 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 NAA25Q14CX7 972 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 TBRG1Q3YBR2 411 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 RABL3Q5HYI8 236 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 CBWD5Q5RIA9 395 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 SP5Q6BEB4 398 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 IL27RAQ6UWB1 636 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 CRELD2Q6UXH1 353 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 RAB11FIP4Q86YS3 637 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 ULK2Q8IYT8 1036 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 CARNMT1Q8N4J0 409 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 C11orf44Q8N8P7 122 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 ZCCHC10Q8TBK6 192 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 RUFY2Q8WXA3 655 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 ATG4AQ8WYN0 398 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 BOD1Q96IK1 185 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 PPP1R10Q96QC0 940 aaKnown RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 PIGSQ96S52 555 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 ADOQ96SZ5 270 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 CD180Q99467 661 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 NUDT22Q9BRQ3 303 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 C17orf80Q9BSJ5 609 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 HTATIP2Q9BUP3 242 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 SSBP3Q9BWW4 388 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 APOL6Q9BWW8 343 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 ACTRT3Q9BYD9 372 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 TPSD1Q9BZJ3 242 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 EDEM3Q9BZQ6 932 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 AMBRA1Q9C0C7 1298 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 XYLT2Q9H1B5 865 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 ZNF768Q9H5H4 540 aaKnown RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 KAT14Q9H8E8 782 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 XAB2Q9HCS7 855 aaKnown RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 PDE7BQ9NP56 450 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 AKIP1Q9NQ31 210 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 INTS13Q9NVM9 706 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 CPSF2Q9P2I0 782 aaKnown RBP4.51□□□□□ -1.69
VPS13D-207ENST00000476169 GTF3C4Q9UKN8 822 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 RAB21Q9UL25 225 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 RIMKLBQ9ULI2 386 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 SLC27A6Q9Y2P4 619 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 PCDHB7Q9Y5E2 793 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 PCDHA10Q9Y5I2 948 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 KCNE2Q9Y6J6 123 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 FAM169AQ9Y6X4 670 aa4.51□□□□□ -1.69
VPS13D-207ENST00000476169 TBC1D3DA0A087WVF3 549 aa4.5□□□□□ -1.69
VPS13D-207ENST00000476169 TBC1D3IA0A087WXS9 549 aa4.5□□□□□ -1.69
VPS13D-207ENST00000476169 TBC1D3EA0A087X179 549 aa4.5□□□□□ -1.69
VPS13D-207ENST00000476169 TBC1D3KA0A087X1G2 549 aa4.5□□□□□ -1.69
VPS13D-207ENST00000476169 C17orf113A0A1B0GUU1 675 aa4.5□□□□□ -1.69
VPS13D-207ENST00000476169 TBC1D3BA6NDS4 549 aa4.5□□□□□ -1.69
VPS13D-207ENST00000476169 TBC1D3FA6NER0 549 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms