RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 ANKRD7Q92527 254 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 PPP2R3CQ969Q6 453 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 BTN2A3PQ96KV6 586 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 C1orf74Q96LT6 269 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 PNKPQ96T60 521 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 HERPUD2Q9BSE4 406 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 FAM129AQ9BZQ8 928 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 EPC1Q9H2F5 836 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 NSUN3Q9H649 340 aaKnown RBP12.64□□□□□ -0.39
MRPL55-227ENST00000475832 GDF3Q9NR23 364 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 OSER1Q9NX31 292 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 ASIC3Q9UHC3 531 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 DMGDHQ9UI17 866 aaKnown RBP12.64□□□□□ -0.39
MRPL55-227ENST00000475832 NUDT5Q9UKK9 219 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 R3HDM2Q9Y2K5 976 aaKnown RBP12.64□□□□□ -0.39
MRPL55-227ENST00000475832 HEY1Q9Y5J3 304 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 PATJQ8NI35 1801 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 PTPRDP23468 1912 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 ATG2AQ2TAZ0 1938 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 HIDE1A8MVS5 230 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 KCNU1A8MYU2 1149 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 HACD1B0YJ81 288 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 PPP1R12AO14974 1030 aaPredicted RBP12.63□□□□□ -0.39
MRPL55-227ENST00000475832 NCAM2O15394 837 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 PAGE1O75459 146 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 STK10O94804 968 aaKnown RBP12.63□□□□□ -0.39
MRPL55-227ENST00000475832 HNRNPA1P09651 372 aaKnown RBP eCLIP12.63□□□□□ -0.39
MRPL55-227ENST00000475832 RBP3P10745 1247 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 PFKLP17858 780 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 MX2P20592 715 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 IL4RP24394 825 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 EPHB2P29323 1055 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 STIP1P31948 543 aaKnown RBP12.63□□□□□ -0.39
MRPL55-227ENST00000475832 PTGIRP43119 386 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 KCNJ1P48048 391 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 SLC11A2P49281 568 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 CLCN4P51793 760 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 DRG2P55039 364 aaKnown RBP12.63□□□□□ -0.39
MRPL55-227ENST00000475832 VSNL1P62760 191 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 NRG1Q02297 640 aaPredicted RBP12.63□□□□□ -0.39
MRPL55-227ENST00000475832 XRCC4Q13426 336 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 EIF4EBP2Q13542 120 aaPredicted RBP12.63□□□□□ -0.39
MRPL55-227ENST00000475832 PTK6Q13882 451 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 NOMO1Q15155 1222 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 RWDD4Q6NW29 188 aaKnown RBP12.63□□□□□ -0.39
MRPL55-227ENST00000475832 CCNI2Q6ZMN8 369 aaPredicted RBP12.63□□□□□ -0.39
MRPL55-227ENST00000475832 ANKS1BQ7Z6G8 1248 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 ZDHHC14Q8IZN3 488 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 PYROXD2Q8N2H3 581 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 LEMD2Q8NC56 503 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 SLC35B2Q8TB61 432 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 HNRNPLLQ8WVV9 542 aaKnown RBP12.63□□□□□ -0.39
MRPL55-227ENST00000475832 PLD4Q96BZ4 506 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 LRRC45Q96CN5 670 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 TBC1D31Q96DN5 1066 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 SLC39A13Q96H72 371 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 DDX50Q9BQ39 737 aaKnown RBP12.63□□□□□ -0.39
MRPL55-227ENST00000475832 SIK2Q9H0K1 926 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 CCSER2Q9H7U1 834 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 ASAH2Q9NR71 780 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 ARHGEF4Q9NR80 690 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 DNPEPQ9ULA0 475 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 PLXNA4Q9HCM2 1894 aa12.63□□□□□ -0.39
MRPL55-227ENST00000475832 MYO7AQ13402 2215 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 ZDBF2Q9HCK1 2354 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.62□□□□□ -0.39
MRPL55-227ENST00000475832 ZMYND10O75800 440 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 KRT14P02533 472 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 HMBSP08397 361 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 SRGAP2BP0DMP2 458 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 H2AFXP16104 143 aaPredicted RBP12.62□□□□□ -0.39
MRPL55-227ENST00000475832 AMPD1P23109 780 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 HOXA9P31269 272 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 ADCY8P40145 1251 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 PGFP49763 221 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 MRPS25P82663 173 aaKnown RBP12.62□□□□□ -0.39
MRPL55-227ENST00000475832 CAV1Q03135 178 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 ADCY2Q08462 1091 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 PDK1Q15118 436 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 ARHGAP15Q53QZ3 475 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 TCEAL5Q5H9L2 206 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 C4orf22Q6V702 233 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 CEP128Q6ZU80 1094 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 LZTR1Q8N653 840 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 ALLCQ8N6M5 410 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 PQLC3Q8N755 202 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 FCRL2Q96LA5 508 aaPredicted RBP12.62□□□□□ -0.39
MRPL55-227ENST00000475832 TRIM31Q9BZY9 425 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 BRD8Q9H0E9 1235 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 DPH5Q9H2P9 285 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 MTRF1LQ9UGC7 380 aaKnown RBP12.62□□□□□ -0.39
MRPL55-227ENST00000475832 BRWD1Q9NSI6 2320 aa12.62□□□□□ -0.39
MRPL55-227ENST00000475832 CLASP2O75122 1294 aaKnown RBP12.61□□□□□ -0.39
MRPL55-227ENST00000475832 TBX18O95935 607 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 IFNB1P01574 187 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 F11P03951 625 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 MBL2P11226 248 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-227ENST00000475832 PECAM1P16284 738 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-227ENST00000475832 PTPN2P17706 415 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 ERCC2P18074 760 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms