RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ACBD5Q5T8D3 534 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-210ENST00000475329 MANEALQ5VSG8 457 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 NUGGCQ68CJ6 796 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 LILRA6Q6PI73 481 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 KLHDC10Q6PID8 442 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 SPATA31D4Q6ZUB0 917 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 DNAJB7Q7Z6W7 309 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-210ENST00000475329 PRUNE1Q86TP1 453 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 MRPL43Q8N983 215 aaKnown RBP14.17□□□□□ -0.14
TRAF4-210ENST00000475329 FAM71DQ8N9W8 422 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 GLIS1Q8NBF1 620 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 FBXO25Q8TCJ0 367 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 RTP4Q96DX8 246 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 BTN2A3PQ96KV6 586 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 CATSPERBQ9H7T0 1116 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 C10orf88Q9H8K7 445 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 VIPAS39Q9H9C1 493 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 ANAPC5Q9UJX4 755 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 PCDHA11Q9Y5I1 949 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 HS3ST4Q9Y661 456 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 MKI67P46013 3256 aaKnown RBP14.17□□□□□ -0.14
TRAF4-210ENST00000475329 CLUHO75153 1309 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 SASH3O75995 380 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 MAP3K6O95382 1288 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 C8AP07357 584 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 HMBSP08397 361 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 SRGAP2BP0DMP2 458 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 MYOGP15173 224 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 DNAJB1P25685 340 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 RBL1P28749 1068 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 ACTN2P35609 894 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 HSPA9P38646 679 aaKnown RBP14.16□□□□□ -0.14
TRAF4-210ENST00000475329 SHHQ15465 462 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 PIK3R6Q5UE93 754 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 RWDD4Q6NW29 188 aaKnown RBP14.16□□□□□ -0.14
TRAF4-210ENST00000475329 TMC3Q7Z5M5 1100 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 ELMOD1Q8N336 334 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 KREMEN2Q8NCW0 462 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 TFB1MQ8WVM0 346 aaKnown RBP14.16□□□□□ -0.14
TRAF4-210ENST00000475329 C1orf74Q96LT6 269 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 TGS1Q96RS0 853 aaKnown RBP14.16□□□□□ -0.14
TRAF4-210ENST00000475329 FERMT1Q9BQL6 677 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 USP29Q9HBJ7 922 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 XPO7Q9UIA9 1087 aaKnown RBP14.16□□□□□ -0.14
TRAF4-210ENST00000475329 HPCAL4Q9UM19 191 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 NEU3Q9UQ49 428 aa14.16□□□□□ -0.14
TRAF4-210ENST00000475329 HIDE1A8MVS5 230 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 GRXCR1A8MXD5 290 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 E9PAM4 449 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 NCAM2O15394 837 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 COCHO43405 550 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 ARHGEF15O94989 841 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 CSPG5O95196 566 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 SLC34A2O95436 690 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 CA3P07451 260 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 MX2P20592 715 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 RPL22P35268 128 aaKnown RBP14.15□□□□□ -0.14
TRAF4-210ENST00000475329 MLLT6P55198 1093 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-210ENST00000475329 PRKD1Q15139 912 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-210ENST00000475329 PABPC1LQ4VXU2 614 aaKnown RBP14.15□□□□□ -0.14
TRAF4-210ENST00000475329 HEATR6Q6AI08 1181 aaKnown RBP14.15□□□□□ -0.14
TRAF4-210ENST00000475329 HIBCHQ6NVY1 386 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-210ENST00000475329 RHBDF2Q6PJF5 856 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 C4orf22Q6V702 233 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 B4GALNT4Q76KP1 1039 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 PCGF5Q86SE9 256 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 MICAL1Q8TDZ2 1067 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 PLD4Q96BZ4 506 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 FOXP3Q9BZS1 431 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 BRD8Q9H0E9 1235 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 TSPYL1Q9H0U9 437 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 ZNF334Q9HCZ1 680 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-210ENST00000475329 PAK5Q9P286 719 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 TPX2Q9ULW0 747 aaKnown RBP14.15□□□□□ -0.14
TRAF4-210ENST00000475329 SHOC2Q9UQ13 582 aa14.15□□□□□ -0.14
TRAF4-210ENST00000475329 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-210ENST00000475329 GRM6O15303 877 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 PPFIA2O75334 1257 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 STK10O94804 968 aaKnown RBP14.14□□□□□ -0.15
TRAF4-210ENST00000475329 C1RP00736 705 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 OAS1P00973 400 aaKnown RBP14.14□□□□□ -0.15
TRAF4-210ENST00000475329 ERVK-21P61565 698 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 COG7P83436 770 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 DHX9Q08211 1270 aaKnown RBP14.14□□□□□ -0.15
TRAF4-210ENST00000475329 GALNT2Q10471 571 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 SLMAPQ14BN4 828 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 MORF4L2Q15014 288 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 MS4A13Q5J8X5 152 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 SPDYCQ5MJ68 293 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 PPM1LQ5SGD2 360 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 FAM109BQ6ICB4 259 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-210ENST00000475329 PDE12Q6L8Q7 609 aaKnown RBP14.14□□□□□ -0.15
TRAF4-210ENST00000475329 LRRC31Q6UY01 552 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 CEP128Q6ZU80 1094 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 RTL10Q7L3V2 364 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 SPRED2Q7Z698 418 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 CCDC33Q8N5R6 958 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 LZTR1Q8N653 840 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 NPWQ8N729 165 aa14.14□□□□□ -0.15
TRAF4-210ENST00000475329 TSEN2Q8NCE0 465 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms