RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 TRUB2O95900 331 aaKnown RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 MOCS2O96007 188 aaPredicted RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 IGLV3-25P01717 112 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 PABPC1P11940 636 aaKnown RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 ITPKAP23677 461 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 PITX1P78337 314 aaPredicted RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 ARID5AQ03989 594 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 KLHDC7AQ5VTJ3 777 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 LYSMD4Q5XG99 296 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 KIAA1324Q6UXG2 1013 aaKnown RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 RBM43Q6ZSC3 357 aaKnown RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 SYT12Q8IV01 421 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 FAM71AQ8IYT1 594 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 AHI1Q8N157 1196 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 HJURPQ8NCD3 748 aaPredicted RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 C1orf131Q8NDD1 294 aaKnown RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 ENOX1Q8TC92 643 aaKnown RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 CYB5D2Q8WUJ1 264 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 MYEOVQ96EZ4 313 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 PRICKLE1Q96MT3 831 aaPredicted RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 GBP4Q96PP9 640 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 DDX50Q9BQ39 737 aaKnown RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 MKRN2Q9H000 416 aaKnown RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 NUCKS1Q9H1E3 243 aaKnown RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 PRDM16Q9HAZ2 1276 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 STIM2Q9P246 746 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 XPO7Q9UIA9 1087 aaKnown RBP12.71□□□□□ -0.37
SSR1-205ENST00000475213 PILRBQ9UKJ0 227 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 NFE2L3Q9Y4A8 694 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 FHOD1Q9Y613 1164 aa12.71□□□□□ -0.37
SSR1-205ENST00000475213 ATXN2Q99700 1313 aaKnown RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 CACNA1EQ15878 2313 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 APOEP02649 317 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 EPHX1P07099 455 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 GLI1P08151 1106 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 HLA-EP13747 358 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 EEF1GP26641 437 aaKnown RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 CD70P32970 193 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 KRT9P35527 623 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 COPAP53621 1224 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 RPS24P62847 133 aaKnown RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 IRX4P78413 519 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 ZNF33AQ06730 810 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 EIF4EBP2Q13542 120 aaPredicted RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 RAPGEF1Q13905 1077 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 DRAP1Q14919 205 aaPredicted RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 PTPRNQ16849 979 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 DCAF6Q58WW2 860 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 ZC3H12AQ5D1E8 599 aaKnown RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 TRIM61Q5EBN2 209 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 MS4A13Q5J8X5 152 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 PPM1JQ5JR12 505 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 EFHC1Q5JVL4 640 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 PEAR1Q5VY43 1037 aaPredicted RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 MBLAC2Q68D91 279 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 SERPINA13PQ6UXR4 307 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 FAM183BPQ6ZVS7 135 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 METTL3Q86U44 580 aaKnown RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 TMPRSS6Q8IU80 811 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 SLC41A1Q8IVJ1 513 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 MFN1Q8IWA4 741 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 DEFB106AQ8N104 65 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 FIBINQ8TAL6 211 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 DDX1Q92499 740 aaKnown RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 LMLNQ96KR4 655 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 NOX5Q96PH1 765 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 SLC2A13Q96QE2 648 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 LSM14BQ9BX40 385 aaKnown RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 NAA15Q9BXJ9 866 aaKnown RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 TMEM245Q9H330 911 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 PLCB1Q9NQ66 1216 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 ASNSD1Q9NWL6 643 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 USP36Q9P275 1121 aaKnown RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 EVLQ9UI08 416 aaPredicted RBP12.7□□□□□ -0.38
SSR1-205ENST00000475213 PLA2G4CQ9UP65 541 aa12.7□□□□□ -0.38
SSR1-205ENST00000475213 TYW5A2RUC4 315 aaKnown RBP12.69□□□□□ -0.38
SSR1-205ENST00000475213 C4orf47A7E2U8 309 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 HSF2BPO75031 334 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 NDUFS2O75306 463 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 GRAP2O75791 330 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 ERBB2P04626 1255 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 UCHL3P15374 230 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 POLR2EP19388 210 aaKnown RBP12.69□□□□□ -0.38
SSR1-205ENST00000475213 DPP6P42658 865 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 BPIFB4P59827 614 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 CDK17Q00537 523 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 LMAN2Q12907 356 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 PTPN20Q4JDL3 420 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 FNDC3BQ53EP0 1204 aaKnown RBP12.69□□□□□ -0.38
SSR1-205ENST00000475213 PPP1R15BQ5SWA1 713 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 OR6B2Q6IFH4 312 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 OLFML1Q6UWY5 402 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 C11orf57Q6ZUT1 292 aaPredicted RBP12.69□□□□□ -0.38
SSR1-205ENST00000475213 CFAP52Q8N1V2 620 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 CARNMT1Q8N4J0 409 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 ZNF366Q8N895 744 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 ZNF557Q8N988 423 aaPredicted RBP12.69□□□□□ -0.38
SSR1-205ENST00000475213 SIPA1Q96FS4 1042 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 BTN2A3PQ96KV6 586 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 NUSAP1Q9BXS6 441 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms