RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ZNF296Q8WUU4 475 aaPredicted RBP22.41■■□□□ 1.18
CCM2-206ENST00000474617 RNF34Q969K3 372 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 MTBPQ96DY7 904 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 CATSPERBQ9H7T0 1116 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 LRFN2Q9ULH4 789 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 PSMD3O43242 534 aa22.4■■□□□ 1.18
CCM2-206ENST00000474617 RTN3O95197 1032 aaPredicted RBP22.4■■□□□ 1.18
CCM2-206ENST00000474617 ALDH2P05091 517 aa22.4■■□□□ 1.18
CCM2-206ENST00000474617 IBSPP21815 317 aaPredicted RBP22.4■■□□□ 1.18
CCM2-206ENST00000474617 CNTFP26441 200 aa22.4■■□□□ 1.18
CCM2-206ENST00000474617 HOXC13P31276 330 aa22.4■■□□□ 1.18
CCM2-206ENST00000474617 IFRD2Q12894 506 aaPredicted RBP22.4■■□□□ 1.18
CCM2-206ENST00000474617 SLC39A12Q504Y0 691 aa22.4■■□□□ 1.18
CCM2-206ENST00000474617 HP1BP3Q5SSJ5 553 aaPredicted RBP22.4■■□□□ 1.18
CCM2-206ENST00000474617 LRRC6Q86X45 466 aa22.4■■□□□ 1.18
CCM2-206ENST00000474617 CCNYQ8ND76 341 aa22.4■■□□□ 1.18
CCM2-206ENST00000474617 GSDMBQ8TAX9 411 aa22.4■■□□□ 1.18
CCM2-206ENST00000474617 DCAKDQ8WVC6 231 aa22.4■■□□□ 1.18
CCM2-206ENST00000474617 RRP15Q9Y3B9 282 aaKnown RBP22.4■■□□□ 1.18
CCM2-206ENST00000474617 KRT37O76014 449 aa22.39■■□□□ 1.17
CCM2-206ENST00000474617 APOEP02649 317 aa22.39■■□□□ 1.17
CCM2-206ENST00000474617 SERPINB9P50453 376 aa22.39■■□□□ 1.17
CCM2-206ENST00000474617 VARS2Q5ST30 1063 aaKnown RBP22.39■■□□□ 1.17
CCM2-206ENST00000474617 PIGWQ7Z7B1 504 aa22.39■■□□□ 1.17
CCM2-206ENST00000474617 CCDC197Q8NCU1 140 aa22.39■■□□□ 1.17
CCM2-206ENST00000474617 SPPL2BQ8TCT7 592 aa22.39■■□□□ 1.17
CCM2-206ENST00000474617 EDEM1Q92611 657 aa22.39■■□□□ 1.17
CCM2-206ENST00000474617 SEC16BQ96JE7 1060 aa22.39■■□□□ 1.17
CCM2-206ENST00000474617 CABS1Q96KC9 395 aa22.39■■□□□ 1.17
CCM2-206ENST00000474617 LGMNQ99538 433 aa22.39■■□□□ 1.17
CCM2-206ENST00000474617 OLA1Q9NTK5 396 aaKnown RBP22.39■■□□□ 1.17
CCM2-206ENST00000474617 IL37Q9NZH6 218 aa22.39■■□□□ 1.17
CCM2-206ENST00000474617 FAM169AQ9Y6X4 670 aa22.39■■□□□ 1.17
CCM2-206ENST00000474617 SDR42E2A6NKP2 422 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 VIMP08670 466 aaKnown RBP22.38■■□□□ 1.17
CCM2-206ENST00000474617 FGFR3P22607 806 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 EPHB2P29323 1055 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 VEGFBP49765 207 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 NRLP54845 237 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 ARMC3Q5W041 872 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 STEAP4Q687X5 459 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 NPAS4Q8IUM7 802 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 TAB3Q8N5C8 712 aaPredicted RBP22.38■■□□□ 1.17
CCM2-206ENST00000474617 ADAM32Q8TC27 787 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 SIGLEC10Q96LC7 697 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 C1orf74Q96LT6 269 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 TMEM209Q96SK2 561 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 RHOBTB2Q9BYZ6 727 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 PAK6Q9NQU5 681 aaPredicted RBP22.38■■□□□ 1.17
CCM2-206ENST00000474617 PCDHA11Q9Y5I1 949 aa22.38■■□□□ 1.17
CCM2-206ENST00000474617 FAM92AA1XBS5 289 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 CARNS1A5YM72 827 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 NBNO60934 754 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 BANF1O75531 89 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 SUN1O94901 812 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 GARSP41250 739 aaKnown RBP22.37■■□□□ 1.17
CCM2-206ENST00000474617 CORO7P57737 925 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 WASHC5Q12768 1159 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 FRG1Q14331 258 aaKnown RBP22.37■■□□□ 1.17
CCM2-206ENST00000474617 PKN2Q16513 984 aaKnown RBP22.37■■□□□ 1.17
CCM2-206ENST00000474617 CTXN3Q4LDR2 81 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 TTC39BQ5VTQ0 682 aaPredicted RBP22.37■■□□□ 1.17
CCM2-206ENST00000474617 C6orf89Q6UWU4 347 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 CAPN12Q6ZSI9 719 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 DBF4BQ8NFT6 615 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 DENND1AQ8TEH3 1009 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 CASD1Q96PB1 797 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 TSGA13Q96PP4 275 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 CLIC5Q9NZA1 410 aa22.37■■□□□ 1.17
CCM2-206ENST00000474617 TYROBPO43914 113 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 KRT38O76015 456 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 LRIG2O94898 1065 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 MAP3K6O95382 1288 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 ASMTLO95671 621 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 CXCL10P02778 98 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 DNAJC3Q13217 504 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 DENND5BQ6ZUT9 1274 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 ZNF534Q76KX8 674 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 IGDCC3Q8IVU1 814 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 ANKRD42Q8N9B4 389 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 TTC17Q96AE7 1141 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 TBC1D31Q96DN5 1066 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 STAMBPL1Q96FJ0 436 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 SPATA17Q96L03 361 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 MAGEB5Q9BZ81 275 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 ABI2Q9NYB9 513 aaPredicted RBP22.36■■□□□ 1.17
CCM2-206ENST00000474617 KLHL8Q9P2G9 620 aaPredicted RBP22.36■■□□□ 1.17
CCM2-206ENST00000474617 OGDHLQ9ULD0 1010 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 TLR6Q9Y2C9 796 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 PRG3Q9Y2Y8 225 aaPredicted RBP22.36■■□□□ 1.17
CCM2-206ENST00000474617 TTLL3Q9Y4R7 772 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 FAM72CH0Y354 149 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 MT-ND3P03897 115 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 KBTBD12Q3ZCT8 623 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 FAM72AQ5TYM5 149 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 FAM72DQ6L9T8 149 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 ANKS3Q6ZW76 656 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 TAX1BP1Q86VP1 789 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 FAM72BQ86X60 149 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 SCN4BQ8IWT1 228 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms