RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 MBLAC2Q68D91 279 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 SERPINA13PQ6UXR4 307 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 SLC36A4Q6YBV0 504 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 DGLUCYQ7Z3D6 616 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 METTL3Q86U44 580 aaKnown RBP11.59□□□□□ -0.55
CKS1B-206ENST00000474215 ERICH1Q86X53 443 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 MFN1Q8IWA4 741 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 CCDC117Q8IWD4 279 aaPredicted RBP11.59□□□□□ -0.55
CKS1B-206ENST00000474215 LGI2Q8N0V4 545 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 CFAP52Q8N1V2 620 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 ATP6V0D2Q8N8Y2 350 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 ZNF397Q8NF99 534 aaPredicted RBP11.59□□□□□ -0.55
CKS1B-206ENST00000474215 WFDC5Q8TCV5 224 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 NETO1Q8TDF5 533 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 RNF34Q969K3 372 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 C18orf8Q96DM3 657 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 MYEOVQ96EZ4 313 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 LMLNQ96KR4 655 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 PRICKLE1Q96MT3 831 aaPredicted RBP11.59□□□□□ -0.55
CKS1B-206ENST00000474215 NUCKS1Q9H1E3 243 aaKnown RBP11.59□□□□□ -0.55
CKS1B-206ENST00000474215 SLC6A17Q9H1V8 727 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 PRDM16Q9HAZ2 1276 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 NLRC4Q9NPP4 1024 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 NOCTQ9UK39 431 aaKnown RBP11.59□□□□□ -0.55
CKS1B-206ENST00000474215 SIK3Q9Y2K2 1263 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 DCHS1Q96JQ0 3298 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 SYNJ2BP-COX16A0A087WUM0 186 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 LGALS16A8MUM7 142 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 SLC30A4O14863 429 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 EPHB6O15197 1021 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 AP5Z1O43299 807 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 DAB1O75553 588 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 GFPT2O94808 682 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 EPHX1P07099 455 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 MMEP08473 750 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 DLDP09622 509 aaKnown RBP11.58□□□□□ -0.56
CKS1B-206ENST00000474215 POLR2EP19388 210 aaKnown RBP11.58□□□□□ -0.56
CKS1B-206ENST00000474215 TACR2P21452 398 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 PRKCHP24723 683 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 SOX5P35711 763 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 SCNN1AP37088 669 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 MATKP42679 507 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 ATXN1P54253 815 aaKnown RBP11.58□□□□□ -0.56
CKS1B-206ENST00000474215 JAM2P57087 298 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 RNASE9P60153 205 aaKnown RBP11.58□□□□□ -0.56
CKS1B-206ENST00000474215 CDR2Q01850 454 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 RPL6Q02878 288 aaKnown RBP11.58□□□□□ -0.56
CKS1B-206ENST00000474215 UBXN1Q04323 297 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 NME3Q13232 169 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 MTA1Q13330 715 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 AASDHQ4L235 1098 aaPredicted RBP11.58□□□□□ -0.56
CKS1B-206ENST00000474215 FNDC3BQ53EP0 1204 aaKnown RBP11.58□□□□□ -0.56
CKS1B-206ENST00000474215 RAP1GAP2Q684P5 730 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 KIAA1324Q6UXG2 1013 aaKnown RBP11.58□□□□□ -0.56
CKS1B-206ENST00000474215 CYP2U1Q7Z449 544 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 ZNF677Q86XU0 584 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 CARNMT1Q8N4J0 409 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 AOPEPQ8N6M6 819 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 EPS8L1Q8TE68 723 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 CYB5D2Q8WUJ1 264 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 CPA5Q8WXQ8 436 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 PIGKQ92643 395 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 TTC17Q96AE7 1141 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 PCMTD1Q96MG8 357 aaPredicted RBP11.58□□□□□ -0.56
CKS1B-206ENST00000474215 SPAG5Q96R06 1193 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 PRMT1Q99873 361 aaKnown RBP11.58□□□□□ -0.56
CKS1B-206ENST00000474215 RTKNQ9BST9 563 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 MKRN2Q9H000 416 aaKnown RBP11.58□□□□□ -0.56
CKS1B-206ENST00000474215 HSD3B7Q9H2F3 369 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 TMEM245Q9H330 911 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 SMOC1Q9H4F8 434 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 ITM2CQ9NQX7 267 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 RRN3Q9NYV6 651 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.58□□□□□ -0.56
CKS1B-206ENST00000474215 COX16Q9P0S2 106 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 CYP8B1Q9UNU6 501 aa11.58□□□□□ -0.56
CKS1B-206ENST00000474215 LAMA1P25391 3075 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 IGHV1OR15-9A0A0B4J2B8 117 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 F5H5T6 163 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 H0Y626 953 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 M0QYT0 321 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 KHNYNO15037 678 aaKnown RBP11.57□□□□□ -0.56
CKS1B-206ENST00000474215 LUC7L3O95232 432 aaKnown RBP11.57□□□□□ -0.56
CKS1B-206ENST00000474215 STAT1P42224 750 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 PTGER3P43115 390 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 NOMO3P69849 1222 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 LMAN2Q12907 356 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 CAMK2GQ13555 558 aaPredicted RBP11.57□□□□□ -0.56
CKS1B-206ENST00000474215 CDH18Q13634 790 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 PTPRNQ16849 979 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 ANO6Q4KMQ2 910 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 FSCBQ5H9T9 825 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 NAA35Q5VZE5 725 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 TCEAL6Q6IPX3 200 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 CAVIN1Q6NZI2 390 aaKnown RBP11.57□□□□□ -0.56
CKS1B-206ENST00000474215 APTXQ7Z2E3 356 aaKnown RBP11.57□□□□□ -0.56
CKS1B-206ENST00000474215 CHSY1Q86X52 802 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 XYLT1Q86Y38 959 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 TMPRSS6Q8IU80 811 aa11.57□□□□□ -0.56
CKS1B-206ENST00000474215 MSANTD4Q8NCY6 345 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms