RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 SYCP1Q15431 976 aa21.22■□□□□ 0.99
SNX13-206ENST00000474067 RNF43Q68DV7 783 aa21.22■□□□□ 0.99
SNX13-206ENST00000474067 RFWD3Q6PCD5 774 aa21.22■□□□□ 0.99
SNX13-206ENST00000474067 KIAA0907Q7Z7F0 614 aaPredicted RBP21.22■□□□□ 0.99
SNX13-206ENST00000474067 ERICH1Q86X53 443 aa21.22■□□□□ 0.99
SNX13-206ENST00000474067 DEFB106AQ8N104 65 aa21.22■□□□□ 0.99
SNX13-206ENST00000474067 KDM1BQ8NB78 822 aa21.22■□□□□ 0.99
SNX13-206ENST00000474067 NEK11Q8NG66 645 aa21.22■□□□□ 0.99
SNX13-206ENST00000474067 ADAM32Q8TC27 787 aa21.22■□□□□ 0.99
SNX13-206ENST00000474067 SIPA1Q96FS4 1042 aa21.22■□□□□ 0.99
SNX13-206ENST00000474067 NAA15Q9BXJ9 866 aaKnown RBP21.22■□□□□ 0.99
SNX13-206ENST00000474067 FANCLQ9NW38 375 aa21.22■□□□□ 0.99
SNX13-206ENST00000474067 KIAA1522Q9P206 1035 aaPredicted RBP21.22■□□□□ 0.99
SNX13-206ENST00000474067 SUSD2Q9UGT4 822 aa21.22■□□□□ 0.99
SNX13-206ENST00000474067 EVLQ9UI08 416 aaPredicted RBP21.22■□□□□ 0.99
SNX13-206ENST00000474067 ANTXRLA6NF34 631 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 PTMSP20962 102 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 BCKDHBP21953 392 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 NNMTP40261 264 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 STAT1P42224 750 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 MATKP42679 507 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 ATXN1P54253 815 aaKnown RBP21.21■□□□□ 0.99
SNX13-206ENST00000474067 ZBTB16Q05516 673 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 FUT11Q495W5 492 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 RNF219Q5W0B1 726 aaPredicted RBP21.21■□□□□ 0.99
SNX13-206ENST00000474067 MBLAC2Q68D91 279 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 OLFML1Q6UWY5 402 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 TRIM72Q6ZMU5 477 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 FAM183BPQ6ZVS7 135 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 WDTC1Q8N5D0 677 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 PIGKQ92643 395 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 STIM2Q9P246 746 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 LIMA1Q9UHB6 759 aaKnown RBP21.21■□□□□ 0.99
SNX13-206ENST00000474067 HCN2Q9UL51 889 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 RAD54BQ9Y620 910 aa21.21■□□□□ 0.99
SNX13-206ENST00000474067 THADAQ6YHU6 1953 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 LUC7L3O95232 432 aaKnown RBP21.2■□□□□ 0.98
SNX13-206ENST00000474067 TACR2P21452 398 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 CD6P30203 668 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 SLC6A4P31645 630 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 SULT2A1Q06520 285 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 PTPN20Q4JDL3 420 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 ZC3H12AQ5D1E8 599 aaKnown RBP21.2■□□□□ 0.98
SNX13-206ENST00000474067 WDR45BQ5MNZ6 344 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 BRMS1LQ5PSV4 323 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 DAB2IPQ5VWQ8 1189 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 KIAA1211LQ6NV74 962 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 LRSAM1Q6UWE0 723 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 TMPRSS6Q8IU80 811 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 TMEFF1Q8IYR6 380 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 LGI2Q8N0V4 545 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 CARNMT1Q8N4J0 409 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 OR2T3Q8NH03 318 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 CD248Q9HCU0 757 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.2■□□□□ 0.98
SNX13-206ENST00000474067 SCML1Q9UN30 329 aa21.2■□□□□ 0.98
SNX13-206ENST00000474067 IGHV1OR15-9A0A0B4J2B8 117 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 A0A1B0GVM2 712 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 TCAF2A6NFQ2 919 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 RNASEH1O60930 286 aaKnown RBP21.19■□□□□ 0.98
SNX13-206ENST00000474067 ERBB2P04626 1255 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 SRPRAP08240 638 aaKnown RBP21.19■□□□□ 0.98
SNX13-206ENST00000474067 GNSP15586 552 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 GABRB2P47870 512 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 COPB1P53618 953 aaKnown RBP21.19■□□□□ 0.98
SNX13-206ENST00000474067 POLR2FP61218 127 aaKnown RBP21.19■□□□□ 0.98
SNX13-206ENST00000474067 ZNF33AQ06730 810 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 SF3A2Q15428 464 aaKnown RBP21.19■□□□□ 0.98
SNX13-206ENST00000474067 TTC31Q49AM3 519 aaPredicted RBP21.19■□□□□ 0.98
SNX13-206ENST00000474067 NADSYN1Q6IA69 706 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 EDEM2Q9BV94 578 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 PCED1AQ9H1Q7 454 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 ITM2CQ9NQX7 267 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 FAM207AQ9NSI2 230 aaPredicted RBP21.19■□□□□ 0.98
SNX13-206ENST00000474067 AJAP1Q9UKB5 411 aaPredicted RBP21.19■□□□□ 0.98
SNX13-206ENST00000474067 CLEC4EQ9ULY5 219 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 CYP8B1Q9UNU6 501 aa21.19■□□□□ 0.98
SNX13-206ENST00000474067 ZNF292O60281 2723 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 GOLGA6L7A0A1B0GV03 622 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 LRRC10BA6NIK2 292 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 LGALS16A8MUM7 142 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 WASH3PC4AMC7 463 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 M0QYT0 321 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 SOX5P35711 763 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 UBXN1Q04323 297 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 TYRO3Q06418 890 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 NME3Q13232 169 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 CAMK2GQ13555 558 aaPredicted RBP21.18■□□□□ 0.98
SNX13-206ENST00000474067 DUOXA1Q1HG43 343 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 FILIP1LQ4L180 1135 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 FAM102AQ5T9C2 384 aaPredicted RBP21.18■□□□□ 0.98
SNX13-206ENST00000474067 RAP1GAP2Q684P5 730 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 ARCQ7LC44 396 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 ADIPOR2Q86V24 386 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 CADM4Q8NFZ8 388 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 EPS8L1Q8TE68 723 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 TTC17Q96AE7 1141 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 PRICKLE1Q96MT3 831 aaPredicted RBP21.18■□□□□ 0.98
SNX13-206ENST00000474067 BPIFA3Q9BQP9 254 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms