RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, human

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-219	ENST00000474042	GTPBP4	Q9BZE4	634 aa	Known RBP	13.93	□□□□□ -0.18
COPS7B-219	ENST00000474042	METTL14	Q9HCE5	456 aa	Known RBP	13.93	□□□□□ -0.18
COPS7B-219	ENST00000474042	PRSS16	Q9NQE7	514 aa		13.93	□□□□□ -0.18
COPS7B-219	ENST00000474042	PLA2G4C	Q9UP65	541 aa		13.93	□□□□□ -0.18
COPS7B-219	ENST00000474042	APOBEC2	Q9Y235	224 aa	Known RBP	13.93	□□□□□ -0.18
COPS7B-219	ENST00000474042	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.93	□□□□□ -0.18
COPS7B-219	ENST00000474042	CABIN1	Q9Y6J0	2220 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	RNF225	M0QZC1	329 aa	Predicted RBP	13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	FLRT2	O43155	660 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	ACSL4	O60488	711 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	SMC2	O95347	1197 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	SEMA4F	O95754	770 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	BRD2	P25440	801 aa	Known RBP	13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	GRIA4	P48058	902 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	RGS7	P49802	495 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	AFF3	P51826	1226 aa	Known RBP	13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	NNT	Q13423	1086 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	STIL	Q15468	1287 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	CNGA2	Q16280	664 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	ZNF776	Q68DI1	518 aa	Predicted RBP	13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	RFWD3	Q6PCD5	774 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	SLCO6A1	Q86UG4	719 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	UNC45B	Q8IWX7	931 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	PNPLA1	Q8N8W4	532 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	ZNF557	Q8N988	423 aa	Predicted RBP	13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	LMO3	Q8TAP4	145 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	CLEC4C	Q8WTT0	213 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	SNX19	Q92543	992 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	ERCC4	Q92889	916 aa	Predicted RBP	13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	KAT5	Q92993	513 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	SMARCE1	Q969G3	411 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	AZIN2	Q96A70	460 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	CEP63	Q96MT8	703 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	ORAI3	Q9BRQ5	295 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	TM9SF3	Q9HD45	589 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	TOR4A	Q9NXH8	423 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	PCDHB4	Q9Y5E5	795 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	KNL1	Q8NG31	2342 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	COL5A1	P20908	1838 aa	Predicted RBP	13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	ADAMTS20	P59510	1910 aa		13.92	□□□□□ -0.18
COPS7B-219	ENST00000474042	GOLGA6L7	A0A1B0GV03	622 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042		M0QYV0	167 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	PIK3R2	O00459	728 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	TBL1X	O60907	577 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	FBXO21	O94952	628 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	ATP5B	P06576	529 aa	Known RBP	13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	RPL34	P49207	117 aa	Known RBP	13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	SLC11A2	P49281	568 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	CSNK1E	P49674	416 aa	Known RBP	13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	TBX4	P57082	545 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	SCAP	Q12770	1279 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	KIF19	Q2TAC6	998 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	TTC31	Q49AM3	519 aa	Predicted RBP	13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	MFN1	Q8IWA4	741 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	PPM1K	Q8N3J5	372 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	HJURP	Q8NCD3	748 aa	Predicted RBP	13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	SETD7	Q8WTS6	366 aa	Known RBP	13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	GOLGA1	Q92805	767 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	TTC17	Q96AE7	1141 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	BIRC7	Q96CA5	298 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	MYEOV	Q96EZ4	313 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	FCRL2	Q96LA5	508 aa	Predicted RBP	13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	HSFY1	Q96LI6	401 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	BTBD1	Q9H0C5	482 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	SGK2	Q9HBY8	427 aa		13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.91	□□□□□ -0.18
COPS7B-219	ENST00000474042	C10orf142	B7Z368	130 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	PSMA7	O14818	248 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	P4HA2	O15460	535 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	CALCA	P01258	141 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	DNTT	P04053	509 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	ASL	P04424	464 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	FYN	P06241	537 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	HOXB3	P14651	431 aa	Predicted RBP	13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	CD44	P16070	742 aa	Known RBP	13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	POLR2E	P19388	210 aa	Known RBP	13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	CD27	P26842	260 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	ARID5B	Q14865	1188 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	TEAD4	Q15561	434 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	TTI2	Q6NXR4	508 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	FOXR2	Q6PJQ5	311 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	ARHGEF19	Q8IW93	802 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	FIBIN	Q8TAL6	211 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	DQX1	Q8TE96	717 aa	Known RBP	13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	IGSF8	Q969P0	613 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	SLC39A13	Q96H72	371 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	MRGPRX3	Q96LB0	322 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	TIGD1	Q96MW7	591 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	SERPINB11	Q96P15	392 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	CDC6	Q99741	560 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	SUN2	Q9UH99	717 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	INTS6	Q9UL03	887 aa	Known RBP	13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	LHX6	Q9UPM6	363 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	BTBD3	Q9Y2F9	522 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	ANKRD6	Q9Y2G4	727 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	SNX11	Q9Y5W9	270 aa		13.9	□□□□□ -0.18
COPS7B-219	ENST00000474042	APC2	O95996	2303 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms