RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 TRIM31Q9BZY9 425 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 ATXN3LQ9H3M9 355 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 TLE6Q9H808 572 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 C10orf88Q9H8K7 445 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 ARHGEF4Q9NR80 690 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 GKN1Q9NS71 199 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 HCFC1R1Q9NWW0 138 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 STIM2Q9P246 746 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 FEZ2Q9UHY8 353 aaPredicted RBP11.1□□□□□ -0.63
SP140-208ENST00000473711 ZNF148Q9UQR1 794 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 DRG1Q9Y295 367 aaKnown RBP11.1□□□□□ -0.63
SP140-208ENST00000473711 HBS1LQ9Y450 684 aaKnown RBP11.1□□□□□ -0.63
SP140-208ENST00000473711 HEY1Q9Y5J3 304 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 HS3ST4Q9Y661 456 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 GBF1Q92538 1859 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 ESYT3A0FGR9 886 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 H7C0C1 242 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 MCF2LO15068 1137 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 LRIG2O94898 1065 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 MAP3K6O95382 1288 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 ECEL1O95672 775 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 C1RP00736 705 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 OAS1P00973 400 aaKnown RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 IGLV3-27P01718 113 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 MBL2P11226 248 aaPredicted RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 GJA1P17302 382 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 PTPN2P17706 415 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 ERCC2P18074 760 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 EPHB2P29323 1055 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 ATP5OP48047 213 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 ZNF135P52742 658 aaPredicted RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 VCPP55072 806 aaKnown RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 MLLT6P55198 1093 aaPredicted RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 VSNL1P62760 191 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 CYP4F8P98187 520 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 RING1Q06587 406 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 SLC10A2Q12908 348 aaPredicted RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 DPYSQ14117 519 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 PPP1R7Q15435 360 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 TRIP13Q15645 432 aaPredicted RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 NCBP2-AS2Q69YL0 99 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 TXNDC8Q6A555 127 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 RWDD4Q6NW29 188 aaKnown RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 DRICH1Q6PGQ1 229 aaPredicted RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 DARS2Q6PI48 645 aaKnown RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 KLHDC10Q6PID8 442 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 CCNI2Q6ZMN8 369 aaPredicted RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 GAREM2Q75VX8 874 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 RTL10Q7L3V2 364 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 GSTA5Q7RTV2 222 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 PRUNE1Q86TP1 453 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 ZC3H18Q86VM9 953 aaKnown RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 DDX42Q86XP3 938 aaKnown RBP eCLIP11.09□□□□□ -0.63
SP140-208ENST00000473711 IFT20Q8IY31 132 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 TDHQ8IZJ6 230 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 CCDC33Q8N5R6 958 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 ARL14EPQ8N8R7 260 aaPredicted RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 NETO2Q8NC67 525 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 GRK7Q8WTQ7 553 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 CASKIN2Q8WXE0 1202 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 IFT81Q8WYA0 676 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 MRPS31Q92665 395 aaKnown RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 NKD2Q969F2 451 aaPredicted RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 C1orf74Q96LT6 269 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 KLF16Q9BXK1 252 aaPredicted RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 FRMD8P1Q9BZ68 369 aaPredicted RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 LMAN2LQ9H0V9 348 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 DPH5Q9H2P9 285 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 PRDM16Q9HAZ2 1276 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 GDF3Q9NR23 364 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 ASAH2Q9NR71 780 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 RAB21Q9UL25 225 aa11.09□□□□□ -0.63
SP140-208ENST00000473711 UTP11Q9Y3A2 253 aaKnown RBP11.09□□□□□ -0.63
SP140-208ENST00000473711 ZNF638Q14966 1978 aaKnown RBP11.08□□□□□ -0.64
SP140-208ENST00000473711 GOLGA6L7A0A1B0GV03 622 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 A0A1W2PRU2 124 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 E9PAM4 449 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 NRG2O14511 850 aaPredicted RBP11.08□□□□□ -0.64
SP140-208ENST00000473711 DCLK1O15075 740 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 KRT14P02533 472 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 TUBBP07437 444 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 RBP3P10745 1247 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 IRF1P10914 325 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 HDCP19113 662 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 MCM3P25205 808 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 CDC25CP30307 473 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 NRIP1P48552 1158 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 NR2C2P49116 596 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 CARSP49589 748 aaKnown RBP11.08□□□□□ -0.64
SP140-208ENST00000473711 TUBP50607 506 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 COG7P83436 770 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 RBM10P98175 930 aaKnown RBP11.08□□□□□ -0.64
SP140-208ENST00000473711 LMNB2Q03252 620 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 GBE1Q04446 702 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 NOMO1Q15155 1222 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 OASLQ15646 514 aaKnown RBP11.08□□□□□ -0.64
SP140-208ENST00000473711 MS4A13Q5J8X5 152 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 PIK3R6Q5UE93 754 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 RAP1GAP2Q684P5 730 aa11.08□□□□□ -0.64
SP140-208ENST00000473711 WDR93Q6P2C0 686 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms