RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 NEK5Q6P3R8 708 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 RAPH1Q70E73 1250 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 G2E3Q7L622 706 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ADAMTSL2Q86TH1 951 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 GTF2IRD2Q86UP8 949 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 GRAMD1CQ8IYS0 662 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 VGLL2Q8N8G2 317 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ADAMTS16Q8TE57 1224 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 TRUB1Q8WWH5 349 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 METTL2AQ96IZ6 378 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ERGIC2Q96RQ1 377 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 PYM1Q9BRP8 204 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 C17orf80Q9BSJ5 609 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 NEK6Q9HC98 313 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 GFOD1Q9NXC2 390 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ARHGAP20Q9P2F6 1191 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 TBC1D14Q9P2M4 693 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ANKMY1Q9P2S6 941 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 XPO7Q9UIA9 1087 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 VPS51Q9UID3 782 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ZBTB21Q9ULJ3 1066 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 RAB26Q9ULW5 256 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 PHTF1Q9UMS5 762 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ANGEL1Q9UNK9 670 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 SRPRBQ9Y5M8 271 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 SPATA31A3Q5VYP0 1347 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 BTNL10A8MVZ5 291 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 KRIT1O00522 736 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 TOMM70O94826 608 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 C8BP07358 591 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 INHBBP09529 407 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 PRKCAP17252 672 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 PTGS2P35354 604 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ALDH3B2P48448 385 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 SLC5A3P53794 718 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 MLLT6P55198 1093 aaPredicted RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 GFRA1P56159 465 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 PRKCEQ02156 737 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 KLRC3Q07444 240 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 FCHO2Q0JRZ9 810 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 PSMD6Q15008 389 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 UBE3CQ15386 1083 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 SF1Q15637 639 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 CLUL1Q15846 466 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 C6orf10Q5SRN2 563 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 CCNJQ5T5M9 372 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 RRAGBQ5VZM2 374 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 DUPD1Q68J44 220 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 NANOGP8Q6NSW7 305 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 STOX1Q6ZVD7 989 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 TXNRD3Q86VQ6 643 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 TMEM151BQ8IW70 566 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 CCDC28AQ8IWP9 274 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 FLAD1Q8NFF5 587 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 CHAC2Q8WUX2 184 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 RPGRQ92834 1020 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 TRIM63Q969Q1 353 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 PAGE5Q96GU1 130 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 Q96M66 194 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 FAM20AQ96MK3 541 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ACAP3Q96P50 834 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 YME1L1Q96TA2 773 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 EDEM3Q9BZQ6 932 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 DNAI2Q9GZS0 605 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 CDH19Q9H159 772 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 NKX2-4Q9H2Z4 354 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 RNF41Q9H4P4 317 aaPredicted RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 KCNK9Q9NPC2 374 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 METP08581 1390 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 MYH11P35749 1972 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 OR5K4A6NMS3 321 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 CASQ2O14958 399 aaPredicted RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 FYB1O15117 783 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 POLR1CO15160 346 aaPredicted RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 EDF1O60869 148 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 BAG2O95816 211 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 RARBP10826 455 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 THRAP10827 490 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 KRT5P13647 590 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 FDFT1P37268 417 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 STX1BP61266 288 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 PPP2R5DQ14738 602 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 OXA1LQ15070 435 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 MAPK6Q16659 721 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 SFT2D3Q587I9 215 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ZNF658Q5TYW1 1059 aaPredicted RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 PAOXQ6QHF9 649 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 KYAT3Q6YP21 454 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 TRMT10CQ7L0Y3 403 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 C11orf96Q7Z7L8 435 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 RNF180Q86T96 592 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ELMOD2Q8IZ81 293 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 RASGEF1CQ8N431 466 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ANKRD42Q8N9B4 389 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 DTWD2Q8NBA8 298 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 WASF1Q92558 559 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 SCARF2Q96GP6 870 aaPredicted RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 MTMR9Q96QG7 549 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 CCDC77Q9BR77 488 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 MROQ9BYG7 248 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms