RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SIKE1Q9BRV8 207 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 XPNPEP3Q9NQH7 507 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 ITGA11Q9UKX5 1188 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 ADCY6O43306 1168 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 PLIN3O60664 434 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 RNASEH1O60930 286 aaKnown RBP21.71■■□□□ 1.07
COL18A1-207ENST00000473212 KLHL2O95198 593 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 CNTFP26441 200 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 COPAP53621 1224 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 TNFAIP2Q03169 654 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 PCLAFQ15004 111 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 NCBP2-AS2Q69YL0 99 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 AFG1LQ8WV93 481 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 PPP2R3CQ969Q6 453 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 FAM192AQ9GZU8 254 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 CYP4F11Q9HBI6 524 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 OTOFQ9HC10 1997 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 PROCP04070 461 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 SEMA5AQ13591 1074 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 PEX6Q13608 980 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 FAM187BQ17R55 369 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 KIZQ2M2Z5 673 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 HEATR6Q6AI08 1181 aaKnown RBP21.7■■□□□ 1.06
COL18A1-207ENST00000473212 AAGABQ6PD74 315 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 PACS1Q6VY07 963 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 DHDDSQ86SQ9 333 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 C10orf107Q8IVU9 208 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 LINC01465Q8N7H1 131 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 SLC26A7Q8TE54 656 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 CCDC124Q96CT7 223 aaKnown RBP21.7■■□□□ 1.06
COL18A1-207ENST00000473212 GLRA3O75311 464 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 IDH3AP50213 366 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 ASPHQ12797 758 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 VWA5B1Q5TIE3 1220 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 LPCAT4Q643R3 524 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 RASSF3Q86WH2 238 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 EIF2AQ9BY44 585 aaKnown RBP21.7■■□□□ 1.06
COL18A1-207ENST00000473212 NFKBIZQ9BYH8 718 aa21.7■■□□□ 1.06
COL18A1-207ENST00000473212 GCOM2Q9BZD3 368 aaPredicted RBP21.7■■□□□ 1.06
COL18A1-207ENST00000473212 A0A0G2JLL6 359 aaPredicted RBP21.69■■□□□ 1.06
COL18A1-207ENST00000473212 A6NJR5 290 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 MGAT1P26572 445 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 NIPAL4Q0D2K0 466 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 CCNIQ14094 377 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 DPYSL2Q16555 572 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 STXBP5Q5T5C0 1151 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 MARK2Q7KZI7 788 aaKnown RBP21.69■■□□□ 1.06
COL18A1-207ENST00000473212 PRRT2Q7Z6L0 340 aaPredicted RBP21.69■■□□□ 1.06
COL18A1-207ENST00000473212 HIPK4Q8NE63 616 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 OR6Y1Q8NGX8 325 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 ATXN7L3BQ96GX2 97 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 QKIQ96PU8 341 aaKnown RBP eCLIP21.69■■□□□ 1.06
COL18A1-207ENST00000473212 SORT1Q99523 831 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 MFSD11O43934 449 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 SERPINE1P05121 402 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 ABCG1P45844 678 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 RABGGTBP53611 331 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 TTLL4Q14679 1199 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 DBN1Q16643 649 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 CFAP157Q5JU67 520 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 STEAP4Q687X5 459 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 MTHFD1LQ6UB35 978 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 PDSS2Q86YH6 399 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 EFCAB3Q8N7B9 438 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 ACMSDQ8TDX5 336 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 PPP4R1Q8TF05 950 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 SLC16A10Q8TF71 515 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 ATP2A3Q93084 1043 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 ADAMTS6Q9UKP5 1117 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 KIAA1257Q9ULG3 409 aa21.69■■□□□ 1.06
COL18A1-207ENST00000473212 MAGED2Q9UNF1 606 aaPredicted RBP21.69■■□□□ 1.06
COL18A1-207ENST00000473212 CCNT2O60583 730 aaKnown RBP21.68■■□□□ 1.06
COL18A1-207ENST00000473212 ALDH1A2O94788 518 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 PRKCGP05129 697 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 SFT2D3Q587I9 215 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 ADGRG6Q86SQ4 1221 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 MOCOSQ96EN8 888 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 STN1Q9H668 368 aaKnown RBP21.68■■□□□ 1.06
COL18A1-207ENST00000473212 ACSS2Q9NR19 701 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 SEPT10Q9P0V9 454 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 CPSF2Q9P2I0 782 aaKnown RBP21.68■■□□□ 1.06
COL18A1-207ENST00000473212 LOC100653049A0A140TA62 436 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.68■■□□□ 1.06
COL18A1-207ENST00000473212 KRT34O76011 436 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 NCF2P19878 526 aaPredicted RBP21.68■■□□□ 1.06
COL18A1-207ENST00000473212 SLC26A2P50443 739 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 BIRC2Q13490 618 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 STILQ15468 1287 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 ARMCX2Q7L311 632 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 SESTD1Q86VW0 696 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 ARNTL2Q8WYA1 636 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 C11orf84Q9BUA3 381 aaPredicted RBP21.68■■□□□ 1.06
COL18A1-207ENST00000473212 OXCT2Q9BYC2 517 aaPredicted RBP21.68■■□□□ 1.06
COL18A1-207ENST00000473212 CDHR5Q9HBB8 845 aa21.68■■□□□ 1.06
COL18A1-207ENST00000473212 CD1EP15812 388 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 DESP17661 470 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 RASIP1Q5U651 963 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 PDPK2PQ6A1A2 396 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 CYS1Q717R9 158 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 CDKL2Q92772 493 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms