RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 FAM228BP0C875 321 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 TFE3P19532 575 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 CLCN6P51797 869 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 ZNF75DP51815 510 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 ADKP55263 362 aaKnown RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 SEC13P55735 322 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 CSTF1Q05048 431 aaKnown RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 TCF15Q12870 199 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 AUHQ13825 339 aaKnown RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 SLC18A3Q16572 532 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 CDO1Q16878 200 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 C2orf27AQ580R0 203 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 EOGTQ5NDL2 527 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 PPP1R15BQ5SWA1 713 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 OTUD1Q5VV17 481 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 TRNP1Q6NT89 227 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 ZC3H14Q6PJT7 736 aaKnown RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 AHI1Q8N157 1196 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 CAMKK1Q8N5S9 505 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 ZNF513Q8N8E2 541 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 PRSS33Q8NF86 280 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 JOSD2Q8TAC2 188 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 OLIG1Q8TAK6 271 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 FIBINQ8TAL6 211 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 WFIKKN2Q8TEU8 576 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 FAM172AQ8WUF8 416 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 CENPIQ92674 756 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 EZH1Q92800 747 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 ZNF653Q96CK0 615 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 CCDC42Q96M95 316 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 PRICKLE1Q96MT3 831 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 RPRD1AQ96P16 312 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 PRMT1Q99873 361 aaKnown RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 NCAPGQ9BPX3 1015 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 CNPY3Q9BT09 278 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 CALCOCO1Q9P1Z2 691 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 STIM2Q9P246 746 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 XPO7Q9UIA9 1087 aaKnown RBP14.69□□□□□ -0.06
BRCA1-211ENST00000472490 H0Y626 953 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 AP5Z1O43299 807 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 AKR1B10O60218 316 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 LUC7L3O95232 432 aaKnown RBP14.68□□□□□ -0.06
BRCA1-211ENST00000472490 ADCY5O95622 1261 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 PLEKP08567 350 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-211ENST00000472490 HOXA6P31267 233 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 TIE1P35590 1138 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 EIF4A3P38919 411 aaKnown RBP14.68□□□□□ -0.06
BRCA1-211ENST00000472490 KIR2DL1P43626 348 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-211ENST00000472490 AIF1P55008 147 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 RPL7AP62424 266 aaKnown RBP14.68□□□□□ -0.06
BRCA1-211ENST00000472490 RPS24P62847 133 aaKnown RBP14.68□□□□□ -0.06
BRCA1-211ENST00000472490 TBX2Q13207 712 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-211ENST00000472490 C15orf59Q2T9L4 293 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-211ENST00000472490 CCDC122Q5T0U0 273 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 RNF43Q68DV7 783 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 FAM131BQ86XD5 332 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 CFAP52Q8N1V2 620 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 FNIP1Q8TF40 1166 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 SIK2Q9H0K1 926 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 KIAA1522Q9P206 1035 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-211ENST00000472490 MMP17Q9ULZ9 603 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 HS3ST4Q9Y661 456 aa14.68□□□□□ -0.06
BRCA1-211ENST00000472490 A0A1B0GVM2 712 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 TCAF2A6NFQ2 919 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 TRIM24O15164 1050 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 ZBTB24O43167 697 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-211ENST00000472490 RNF8O76064 485 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 MOCS3O95396 460 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 GJB6O95452 261 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 ATP5BP06576 529 aaKnown RBP14.67□□□□□ -0.06
BRCA1-211ENST00000472490 SP9P0CG40 484 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 PABPC1P11940 636 aaKnown RBP14.67□□□□□ -0.06
BRCA1-211ENST00000472490 HLA-FP30511 346 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 SGSHP51688 502 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 DGKEP52429 567 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 SATB1Q01826 763 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 MESP2Q0VG99 397 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 SLC12A1Q13621 1099 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 DMC1Q14565 340 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 ACAP1Q15027 740 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 FBXL22Q6P050 247 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 CHPFQ8IZ52 775 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 MAML2Q8IZL2 1156 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-211ENST00000472490 CARNMT1Q8N4J0 409 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.67□□□□□ -0.06
BRCA1-211ENST00000472490 IL17RCQ8NAC3 791 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 ATOH1Q92858 354 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-211ENST00000472490 ADAM33Q9BZ11 813 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 CIPCQ9C0C6 399 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 NHEJ1Q9H9Q4 299 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-211ENST00000472490 ABCB8Q9NUT2 735 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 ELOVL2Q9NXB9 296 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 MYO1AQ9UBC5 1043 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 GGA2Q9UJY4 613 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 VANGL2Q9ULK5 521 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 PLA2G4CQ9UP65 541 aa14.67□□□□□ -0.06
BRCA1-211ENST00000472490 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-211ENST00000472490 CCDC163A0A0D9SF12 145 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 TMEM191CA6NGB0 347 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 PRRT4C9JH25 899 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms