RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ZBED6P86452 979 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 KDSRQ06136 332 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 GOLGA8FQ08AF8 430 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 GOLGA8DPQ0D2H9 430 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 NR1H3Q13133 447 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 FBXO43Q4G163 708 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 PTPN20Q4JDL3 420 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 C2orf27AQ580R0 203 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 TDRD12Q587J7 1177 aaKnown RBP9.54□□□□□ -0.88
SMC4-213ENST00000472282 LY6G5CQ5SRR4 150 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 HECTD3Q5T447 861 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 PRR23CQ6ZRP0 262 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 BHLHA9Q7RTU4 235 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 IRF2BP2Q7Z5L9 587 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 SCD5Q86SK9 330 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 PHTF2Q8N3S3 785 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 CCDC33Q8N5R6 958 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 TMEM35BQ8NCS4 154 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 ZNF397Q8NF99 534 aaPredicted RBP9.54□□□□□ -0.88
SMC4-213ENST00000472282 CLEC4CQ8WTT0 213 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 STK32AQ8WU08 396 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 P2RY11Q96G91 374 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 SCARF2Q96GP6 870 aaPredicted RBP9.54□□□□□ -0.88
SMC4-213ENST00000472282 MRFAP1L1Q96HT8 127 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 NOX5Q96PH1 765 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 CPXM1Q96SM3 734 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 TPSD1Q9BZJ3 242 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 MIS12Q9H081 205 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 LHX5Q9H2C1 402 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 ARRDC1-AS1Q9H2J1 176 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 SMOC1Q9H4F8 434 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 TLR8Q9NR97 1041 aaKnown RBP9.54□□□□□ -0.88
SMC4-213ENST00000472282 RXFP3Q9NSD7 469 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 SEPT11Q9NVA2 429 aaKnown RBP9.54□□□□□ -0.88
SMC4-213ENST00000472282 NAGPAQ9UK23 515 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 INVSQ9Y283 1065 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 LUC7L2Q9Y383 392 aaKnown RBP9.54□□□□□ -0.88
SMC4-213ENST00000472282 CCDC163A0A0D9SF12 145 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.53□□□□□ -0.88
SMC4-213ENST00000472282 E2F8A0AVK6 867 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 YJEFN3A6XGL0 299 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 E7ENQ6 273 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 PAPSS1O43252 624 aaPredicted RBP9.53□□□□□ -0.88
SMC4-213ENST00000472282 TLR5O60602 858 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 FBXO21O94952 628 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 LSM8O95777 96 aaKnown RBP9.53□□□□□ -0.88
SMC4-213ENST00000472282 ERBB2P04626 1255 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 CYP1A1P04798 512 aaPredicted RBP9.53□□□□□ -0.88
SMC4-213ENST00000472282 TPM1P09493 284 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 ADH5P11766 374 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 SKILP12757 684 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 RARGP13631 454 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 PRKCIP41743 596 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 ACADSBP45954 432 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 RNF144AP50876 292 aaPredicted RBP9.53□□□□□ -0.88
SMC4-213ENST00000472282 FOXK2Q01167 660 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 LMNB2Q03252 620 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 SRSF11Q05519 484 aaKnown RBP9.53□□□□□ -0.88
SMC4-213ENST00000472282 KLHL30Q0D2K2 578 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 SF3A2Q15428 464 aaKnown RBP9.53□□□□□ -0.88
SMC4-213ENST00000472282 CSRP2Q16527 193 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 NAA35Q5VZE5 725 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 PM20D1Q6GTS8 502 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 FOXR1Q6PIV2 292 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 TRIM72Q6ZMU5 477 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 SCML4Q8N228 414 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 CAMKK1Q8N5S9 505 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 NAT16Q8N8M0 369 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 OLIG1Q8TAK6 271 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 IPO4Q8TEX9 1081 aaKnown RBP9.53□□□□□ -0.88
SMC4-213ENST00000472282 ZNF592Q92610 1267 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 PPP1R13BQ96KQ4 1090 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 PCDHB18PQ96TA0 734 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 AGPAT1Q99943 283 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 SYT11Q9BT88 431 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 NUCKS1Q9H1E3 243 aaKnown RBP9.53□□□□□ -0.88
SMC4-213ENST00000472282 DUSP15Q9H1R2 295 aaPredicted RBP9.53□□□□□ -0.88
SMC4-213ENST00000472282 HAUS4Q9H6D7 363 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 CYLDQ9NQC7 956 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 CNGB3Q9NQW8 809 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMC4-213ENST00000472282 AIPL1Q9NZN9 384 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 HCN2Q9UL51 889 aa9.53□□□□□ -0.88
SMC4-213ENST00000472282 DNAH14Q0VDD8 3507 aa9.52□□□□□ -0.88
SMC4-213ENST00000472282 SGK1O00141 431 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 SLC9A3R1O14745 358 aaPredicted RBP9.52□□□□□ -0.89
SMC4-213ENST00000472282 MFAP3LO75121 409 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 EPN2O95208 641 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 KAT7O95251 611 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 APBB3O95704 486 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 LTFP02788 710 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 RALAP11233 206 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 TNFAIP3P21580 790 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 BCKDHBP21953 392 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 KIR2DL1P43626 348 aaPredicted RBP9.52□□□□□ -0.89
SMC4-213ENST00000472282 TUBP50607 506 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 DGKEP52429 567 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 ADKP55263 362 aaKnown RBP9.52□□□□□ -0.89
SMC4-213ENST00000472282 YWHAGP61981 247 aaKnown RBP eCLIP9.52□□□□□ -0.891e-117■■■■■ 400.8
SMC4-213ENST00000472282 TBX2Q13207 712 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms