RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 ZNF572Q7Z3I7 529 aaPredicted RBP10.23□□□□□ -0.77
SF3A1-207ENST00000471342 KIAA0907Q7Z7F0 614 aaPredicted RBP10.23□□□□□ -0.77
SF3A1-207ENST00000471342 TMEM25Q86YD3 366 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 DENND1CQ8IV53 801 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 ELMOD1Q8N336 334 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 PHTF2Q8N3S3 785 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 CPXM2Q8N436 756 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 NETO2Q8NC67 525 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 RNF25Q96BH1 459 aaPredicted RBP10.23□□□□□ -0.77
SF3A1-207ENST00000471342 BTN2A3PQ96KV6 586 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 CDK5RAP1Q96SZ6 601 aaKnown RBP10.23□□□□□ -0.77
SF3A1-207ENST00000471342 PSMB7Q99436 277 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 TRIM62Q9BVG3 475 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 CARD9Q9H257 536 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 L2HGDHQ9H9P8 463 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 ARHGEF4Q9NR80 690 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.23□□□□□ -0.77
SF3A1-207ENST00000471342 OBP2AQ9NY56 170 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 COX16Q9P0S2 106 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 PPARGC1AQ9UBK2 798 aaKnown RBP10.23□□□□□ -0.77
SF3A1-207ENST00000471342 LCMT1Q9UIC8 334 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 AMFRQ9UKV5 643 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 AP4E1Q9UPM8 1137 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 COL4A2P08572 1712 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 C19orf67A6NJJ6 358 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 HEPACAM2A8MVW5 462 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 MIF4GDA9UHW6 222 aaKnown RBP10.22□□□□□ -0.77
SF3A1-207ENST00000471342 E9PAM4 449 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 CES2O00748 559 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 TRDMT1O14717 391 aaKnown RBP10.22□□□□□ -0.77
SF3A1-207ENST00000471342 TRIM24O15164 1050 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 CISD3P0C7P0 127 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 TNNT1P13805 278 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 TACR2P21452 398 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 AMPD1P23109 780 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 HOXD9P28356 352 aaPredicted RBP10.22□□□□□ -0.77
SF3A1-207ENST00000471342 VCPP55072 806 aaKnown RBP10.22□□□□□ -0.77
SF3A1-207ENST00000471342 RWDD2BP57060 319 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 RPS24P62847 133 aaKnown RBP10.22□□□□□ -0.77
SF3A1-207ENST00000471342 IHHQ14623 411 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 RPS6KA1Q15418 735 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 TAF12Q16514 161 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 ANKRD20A8PQ5CZ79 823 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 FSCBQ5H9T9 825 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 ADGRF1Q5T601 910 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 RAP1GAP2Q684P5 730 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 TRIM68Q6AZZ1 485 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 SCYL2Q6P3W7 929 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 RFX8Q6ZV50 586 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 RSRC2Q7L4I2 434 aaKnown RBP10.22□□□□□ -0.77
SF3A1-207ENST00000471342 GET4Q7L5D6 327 aaPredicted RBP10.22□□□□□ -0.77
SF3A1-207ENST00000471342 CIR1Q86X95 450 aaPredicted RBP10.22□□□□□ -0.77
SF3A1-207ENST00000471342 ETFBKMTQ8IXQ9 262 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 SYCE1Q8N0S2 351 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 PRELID2Q8N945 189 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 UBE2Q2Q8WVN8 375 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 HSPH1Q92598 858 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 EZH1Q92800 747 aaPredicted RBP10.22□□□□□ -0.77
SF3A1-207ENST00000471342 HLA-CQ95604 372 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 NSMCE3Q96MG7 304 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 NAPGQ99747 312 aaPredicted RBP10.22□□□□□ -0.77
SF3A1-207ENST00000471342 LRRC19Q9H756 370 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 PIDD1Q9HB75 910 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 CD320Q9NPF0 282 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 OR12D3Q9UGF7 316 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 INTS6Q9UL03 887 aaKnown RBP10.22□□□□□ -0.77
SF3A1-207ENST00000471342 NEU2Q9Y3R4 380 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 WNT6Q9Y6F9 365 aa10.22□□□□□ -0.77
SF3A1-207ENST00000471342 SPOPO43791 374 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 PRPSAP2O60256 369 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 ECI2O75521 394 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 RNF8O76064 485 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 KRT7P08729 469 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 IRF1P10914 325 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 BMP1P13497 986 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 ARSAP15289 507 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 PECAM1P16284 738 aaPredicted RBP10.21□□□□□ -0.77
SF3A1-207ENST00000471342 ERCC2P18074 760 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 GBP1P32455 592 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 KPNA1P52294 538 aaPredicted RBP10.21□□□□□ -0.77
SF3A1-207ENST00000471342 CDH6P55285 790 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 GBE1Q04446 702 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 PAFAH1B3Q15102 231 aaKnown RBP10.21□□□□□ -0.77
SF3A1-207ENST00000471342 PPP2R5EQ16537 467 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 IFI16Q16666 785 aaKnown RBP10.21□□□□□ -0.77
SF3A1-207ENST00000471342 NUGGCQ68CJ6 796 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 TMEM215Q68D42 235 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 NPNTQ6UXI9 565 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 BBS12Q6ZW61 710 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 C12orf40Q86WS4 652 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 SLC13A5Q86YT5 568 aaPredicted RBP10.21□□□□□ -0.77
SF3A1-207ENST00000471342 SFTPA1Q8IWL2 248 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 RCOR2Q8IZ40 523 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 ZNF687Q8N1G0 1237 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 TXLNBQ8N3L3 684 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 CELF5Q8N6W0 485 aaKnown RBP10.21□□□□□ -0.77
SF3A1-207ENST00000471342 ACTRT1Q8TDG2 376 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 PPM1EQ8WY54 764 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 ELSPBP1Q96BH3 223 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 ZFYVE19Q96K21 471 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms