RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 MKRN2Q9H000 416 aaKnown RBP9.48□□□□□ -0.89
SF3A1-206ENST00000471037 NUCKS1Q9H1E3 243 aaKnown RBP9.48□□□□□ -0.89
SF3A1-206ENST00000471037 PRDM16Q9HAZ2 1276 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 ITM2CQ9NQX7 267 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 PLK2Q9NYY3 685 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 MYO6Q9UM54 1294 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 LUC7L2Q9Y383 392 aaKnown RBP9.48□□□□□ -0.89
SF3A1-206ENST00000471037 PCDHB9Q9Y5E1 797 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 USP3Q9Y6I4 520 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 DMXL2Q8TDJ6 3036 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 FREM2Q5SZK8 3169 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 MEI4A8MW99 385 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 EPHB6O15197 1021 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 MFAP3LO75121 409 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 CILPO75339 1184 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 KLKB1P03952 638 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 C7P10643 843 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 NCAM1P13591 858 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 MAOBP27338 520 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 OXTRP30559 389 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 CASP14P31944 242 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 KRT9P35527 623 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 IL12RB1P42701 662 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 TPMTP51580 245 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 COG7P83436 770 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 SCAPQ12770 1279 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 ARID5BQ14865 1188 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 EIF4HQ15056 248 aaKnown RBP9.47□□□□□ -0.89
SF3A1-206ENST00000471037 E2F5Q15329 346 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 GEN1Q17RS7 908 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 TSR1Q2NL82 804 aaKnown RBP9.47□□□□□ -0.89
SF3A1-206ENST00000471037 CCNI2Q6ZMN8 369 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-206ENST00000471037 SCD5Q86SK9 330 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 PPM1KQ8N3J5 372 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 ZCCHC9Q8N567 271 aaKnown RBP9.47□□□□□ -0.89
SF3A1-206ENST00000471037 RBBP8NLQ8NC74 664 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-206ENST00000471037 BAHD1Q8TBE0 780 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-206ENST00000471037 UCMAQ8WVF2 138 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 BAP1Q92560 729 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 BHMTQ93088 406 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 ERLEC1Q96DZ1 483 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 PIWIL1Q96J94 861 aaKnown RBP9.47□□□□□ -0.89
SF3A1-206ENST00000471037 SPAG5Q96R06 1193 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 GPR174Q9BXC1 333 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 NAA15Q9BXJ9 866 aaKnown RBP9.47□□□□□ -0.89
SF3A1-206ENST00000471037 STK33Q9BYT3 514 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 DCLK3Q9C098 648 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 NIF3L1Q9GZT8 377 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 CYP3A43Q9HB55 503 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 UBE2TQ9NPD8 197 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-206ENST00000471037 KIAA1522Q9P206 1035 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-206ENST00000471037 NAGPAQ9UK23 515 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 DNAJC12Q9UKB3 198 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 NUDT5Q9UKK9 219 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 PCOLCE2Q9UKZ9 415 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 APOBEC2Q9Y235 224 aaKnown RBP9.47□□□□□ -0.89
SF3A1-206ENST00000471037 GPSM3Q9Y4H4 160 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 FHOD1Q9Y613 1164 aa9.47□□□□□ -0.89
SF3A1-206ENST00000471037 METTL12A8MUP2 240 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 DKK1O94907 266 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 CER1O95813 267 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 RALAP11233 206 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 COPAP53621 1224 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 JAM2P57087 298 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 YWHAEP62258 255 aaKnown RBP9.46□□□□□ -0.9
SF3A1-206ENST00000471037 APBA1Q02410 837 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 LRMPQ12912 555 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 CUL2Q13617 745 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 RAPGEF1Q13905 1077 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 DCAF12L1Q5VU92 463 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 IL27RAQ6UWB1 636 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 DBX2Q6ZNG2 339 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 ANKS1BQ7Z6G8 1248 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 TMPRSS6Q8IU80 811 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 ARHGEF19Q8IW93 802 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 FAM217AQ8IXS0 508 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 CPXM2Q8N436 756 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 TTC39CQ8N584 583 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 PNPLA1Q8N8W4 532 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 TC2NQ8N9U0 490 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 OR8K1Q8NGG5 319 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 C1orf216Q8TAB5 229 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 CPLX3Q8WVH0 158 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 PRCCQ92733 491 aaPredicted RBP9.46□□□□□ -0.9
SF3A1-206ENST00000471037 SYN2Q92777 582 aaPredicted RBP9.46□□□□□ -0.9
SF3A1-206ENST00000471037 TATDN2Q93075 761 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 SIPA1Q96FS4 1042 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 PANX2Q96RD6 677 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 DNAJC7Q99615 494 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 DUSP16Q9BY84 665 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 SLC2A11Q9BYW1 496 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 PCED1AQ9H1Q7 454 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 APOBEC3GQ9HC16 384 aaKnown RBP9.46□□□□□ -0.9
SF3A1-206ENST00000471037 NLRC4Q9NPP4 1024 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 ELOVL2Q9NXB9 296 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 DKK4Q9UBT3 224 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 PCDHGB2Q9Y5G2 931 aa9.46□□□□□ -0.9
SF3A1-206ENST00000471037 ANKRD11Q6UB99 2663 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 CKAP5Q14008 2032 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 F8VZ95 297 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms