RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PCDH19Q8TAB3 1148 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 ACTL9Q8TC94 416 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 CCHCR1Q8TD31 782 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 RSAD2Q8WXG1 361 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 ING5Q8WYH8 240 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 TSC1Q92574 1164 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 ZNF707Q96C28 371 aaPredicted RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 TCEAL4Q96EI5 215 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 APOL5Q9BWW9 433 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 SLC46A2Q9BY10 475 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 ZYG11BQ9C0D3 744 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 DDX47Q9H0S4 455 aaKnown RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 RAB17Q9H0T7 212 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 RETREG1Q9H6L5 497 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 LRRC19Q9H756 370 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 ARHGEF4Q9NR80 690 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 TDP1Q9NUW8 608 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 CLDND1Q9NY35 253 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 CFAP97Q9P2B7 532 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 PPARGC1AQ9UBK2 798 aaKnown RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 VANGL2Q9ULK5 521 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 ARHGAP26Q9UNA1 814 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 UTP11Q9Y3A2 253 aaKnown RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 SNX10Q9Y5X0 201 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 PATJQ8NI35 1801 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 TCRBV7S2A1N4TA0A589 114 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 CFAP69A5D8W1 941 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 FAM187AA6NFU0 413 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 FAM72CH0Y354 149 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 SGK1O00141 431 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 LEFTY2O00292 366 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 SLC9A3R1O14745 358 aaPredicted RBP10.06□□□□□ -0.8
CCM2-204ENST00000470837 LIASO43766 372 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 CYBBP04839 570 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 RHOXF2BP0C7M4 288 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 RHOQP17081 205 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 COILP38432 576 aaPredicted RBP10.06□□□□□ -0.8
CCM2-204ENST00000470837 GGCXP38435 758 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 CCR2P41597 374 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 RBM10P98175 930 aaKnown RBP10.06□□□□□ -0.8
CCM2-204ENST00000470837 SEMA3BQ13214 749 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 ADAM15Q13444 863 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 KCNC3Q14003 757 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 DPYSQ14117 519 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 GRIN2CQ14957 1233 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 CYP1B1Q16678 543 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 PRSS36Q5K4E3 855 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 STXBP5Q5T5C0 1151 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 FAM72AQ5TYM5 149 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 PIK3R6Q5UE93 754 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 FAM72DQ6L9T8 149 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 SYDE1Q6ZW31 735 aaPredicted RBP10.06□□□□□ -0.8
CCM2-204ENST00000470837 GET4Q7L5D6 327 aaPredicted RBP10.06□□□□□ -0.8
CCM2-204ENST00000470837 ZC3H18Q86VM9 953 aaKnown RBP10.06□□□□□ -0.8
CCM2-204ENST00000470837 FAM72BQ86X60 149 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 ZNF354CQ86Y25 554 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 CDKL3Q8IVW4 592 aaPredicted RBP10.06□□□□□ -0.8
CCM2-204ENST00000470837 CCDC89Q8N998 374 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 CCNYQ8ND76 341 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 SH3RF2Q8TEC5 729 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 ATG4AQ8WYN0 398 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 RHOXF2Q9BQY4 288 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 BRD8Q9H0E9 1235 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 ADAM7Q9H2U9 754 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 KIF9Q9HAQ2 790 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 ANLNQ9NQW6 1124 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 GDE1Q9NZC3 331 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 TBC1D14Q9P2M4 693 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 AMACRQ9UHK6 382 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 XPO7Q9UIA9 1087 aaKnown RBP10.06□□□□□ -0.8
CCM2-204ENST00000470837 AGO1Q9UL18 857 aaKnown RBP10.06□□□□□ -0.8
CCM2-204ENST00000470837 MTCH2Q9Y6C9 303 aa10.06□□□□□ -0.8
CCM2-204ENST00000470837 UQCRHLA0A096LP55 91 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 E2F8A0AVK6 867 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 HACD1B0YJ81 288 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 NDC80O14777 642 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 LINC01565O15544 149 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 NEBLO76041 1014 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 UQCRHP07919 91 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 RBP3P10745 1247 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 CEBPBP17676 345 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 OR1E1P30953 314 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 STIP1P31948 543 aaKnown RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 MTHFRP42898 656 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 TERF1P54274 439 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 VCPP55072 806 aaKnown RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 ZNF177Q13360 481 aaPredicted RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 XRCC4Q13426 336 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 PAFAH1B3Q15102 231 aaKnown RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 NOMO1Q15155 1222 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 SLC5A9Q2M3M2 681 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 NCBP2-AS2Q69YL0 99 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 FBXL22Q6P050 247 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 DRICH1Q6PGQ1 229 aaPredicted RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 HTR3DQ70Z44 454 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 ANKS1BQ7Z6G8 1248 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 LRRC49Q8IUZ0 686 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 ARID3BQ8IVW6 561 aaPredicted RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 GPR161Q8N6U8 529 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms