RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	LRRC31	Q6UY01	552 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	ARHGEF18	Q6ZSZ5	1173 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463		Q7L0L9	218 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	RTL10	Q7L3V2	364 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	ITIH5	Q86UX2	942 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	PYROXD2	Q8N2H3	581 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	RIBC1	Q8N443	379 aa	Predicted RBP	11.33	□□□□□ -0.6
SND1-208	ENST00000470463	FIBCD1	Q8N539	461 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	NAT8L	Q8N9F0	302 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	MCU	Q8NE86	351 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	ADAM32	Q8TC27	787 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	HTR3C	Q8WXA8	447 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	CPT1B	Q92523	772 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	PRCC	Q92733	491 aa	Predicted RBP	11.33	□□□□□ -0.6
SND1-208	ENST00000470463	HDAC11	Q96DB2	347 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	VWCE	Q96DN2	955 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	TBC1D31	Q96DN5	1066 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	PGM2	Q96G03	612 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	TRMT2B	Q96GJ1	504 aa	Known RBP	11.33	□□□□□ -0.6
SND1-208	ENST00000470463	BTN2A3P	Q96KV6	586 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	ATP6V1G3	Q96LB4	118 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.33	□□□□□ -0.6
SND1-208	ENST00000470463	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.33	□□□□□ -0.6
SND1-208	ENST00000470463	TMBIM4	Q9HC24	238 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
SND1-208	ENST00000470463	VPS18	Q9P253	973 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.33	□□□□□ -0.6
SND1-208	ENST00000470463	TRHDE	Q9UKU6	1024 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	ASB3	Q9Y575	518 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463	PLXNA3	P51805	1871 aa		11.33	□□□□□ -0.6
SND1-208	ENST00000470463		A0A087WUV0	522 aa	Predicted RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463		A0A0A0MRY4	1105 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	WDR27	A2RRH5	827 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	SLC38A8	A6NNN8	435 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	ERI2	A8K979	691 aa	Known RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463	WASH4P	A8MWX3	477 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463		E7ESA3	106 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	AP3B1	O00203	1094 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	LRIG2	O94898	1065 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	GJB5	O95377	273 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	C1R	P00736	705 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	ZSCAN5DP	P0CG00	497 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	TPSB2	P20231	275 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	MAGEA4	P43358	317 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	MLLT6	P55198	1093 aa	Predicted RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463	TBX4	P57082	545 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	DEFB103A	P81534	67 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	HTRA4	P83105	476 aa	Predicted RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463	GBE1	Q04446	702 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	ZNF844	Q08AG5	666 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	TPSAB1	Q15661	275 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	KRT71	Q3SY84	523 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	PABPC1L	Q4VXU2	614 aa	Known RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463	DNAJC21	Q5F1R6	531 aa	Known RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463	EMC10	Q5UCC4	262 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	ITPRIPL1	Q6GPH6	555 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	TIGD7	Q6NT04	549 aa	Predicted RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463	TAS1R1	Q7RTX1	841 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	TMEM173	Q86WV6	379 aa	Predicted RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463	CCNY	Q8ND76	341 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463	CASP10	Q92851	521 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	SLC39A13	Q96H72	371 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	MYRFL	Q96LU7	910 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	SPATA13	Q96N96	652 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	SERPINB12	Q96P63	405 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463	CLSTN3	Q9BQT9	956 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	SEMA4A	Q9H3S1	761 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	XAB2	Q9HCS7	855 aa	Known RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463	EIF2B3	Q9NR50	452 aa	Known RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463	RAB6B	Q9NRW1	208 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	PSD3	Q9NYI0	1048 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	MARCH2	Q9P0N8	246 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	GMIP	Q9P107	970 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	FETUB	Q9UGM5	382 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	LZTS1	Q9Y250	596 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	MRPL42	Q9Y6G3	142 aa	Known RBP	11.32	□□□□□ -0.6
SND1-208	ENST00000470463		A0A0C4DFX4	3053 aa		11.32	□□□□□ -0.6
SND1-208	ENST00000470463	ZBBX	A8MT70	800 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463		E7EVH7	732 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	RASGRF2	O14827	1237 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	POLR3G	O15318	223 aa	Predicted RBP	11.31	□□□□□ -0.6
SND1-208	ENST00000470463	PSMD3	O43242	534 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	MFSD11	O43934	449 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	PAGE1	O75459	146 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	AGT	P01019	485 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	GSTA2	P09210	222 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	MLN	P12872	115 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	ETS1	P14921	441 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	DNAJB2	P25686	324 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	ATP5C1	P36542	298 aa	Known RBP	11.31	□□□□□ -0.6
SND1-208	ENST00000470463	PBX3	P40426	434 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	RABGGTB	P53611	331 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	EPHB3	P54753	998 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	PPID	Q08752	370 aa	Known RBP	11.31	□□□□□ -0.6
SND1-208	ENST00000470463	GALNT2	Q10471	571 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	AP1B1	Q10567	949 aa		11.31	□□□□□ -0.6
SND1-208	ENST00000470463	SLC10A2	Q12908	348 aa	Predicted RBP	11.31	□□□□□ -0.6
SND1-208	ENST00000470463	NR1H3	Q13133	447 aa		11.31	□□□□□ -0.6

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