RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 TOP1MTQ969P6 601 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 HDAC11Q96DB2 347 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 TMEM169Q96HH4 297 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 PAWRQ96IZ0 340 aaKnown RBP9.63□□□□□ -0.87
SMC1A-205ENST00000469129 C9orf72Q96LT7 481 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 PPP1R2P1Q96PQ5 205 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 VAT1Q99536 393 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 HTATIP2Q9BUP3 242 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 CAPS2Q9BXY5 557 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 CWH43Q9H720 699 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 C10orf88Q9H8K7 445 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 FETUBQ9UGM5 382 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 LGALS13Q9UHV8 139 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 SLC12A6Q9UHW9 1150 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 NOVA2Q9UNW9 492 aaKnown RBP9.63□□□□□ -0.87
SMC1A-205ENST00000469129 CDY1Q9Y6F8 540 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 NUP205Q92621 2012 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 CHD5Q8TDI0 1954 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 MTCL1Q9Y4B5 1905 aaKnown RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 TLDC2A0PJX2 215 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 SMIM23A6NLE4 172 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 NT5C1B-RDH14C9J2C7 533 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 GOLGA8MH3BSY2 632 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 RNF103O00237 685 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 PAGE1O75459 146 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 LRIG2O94898 1065 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 EFEMP2O95967 443 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 URODP06132 367 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 VAV1P15498 845 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 RAG1P15918 1043 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 EPHB2P29323 1055 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 HPDP32754 393 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 TBX4P57082 545 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 MAGOHP61326 146 aaKnown RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 WDR5P61964 334 aaKnown RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 PPIDQ08752 370 aaKnown RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 GALNT2Q10471 571 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 SLC10A2Q12908 348 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 EIF4EBP2Q13542 120 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 BTG3Q14201 252 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 RASA2Q15283 850 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 TRIP4Q15650 581 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 LRRC26Q2I0M4 334 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 BBS9Q3SYG4 887 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 ANKRD20A2Q5SQ80 823 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 ANKRD20A1Q5TYW2 823 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 PRPF38BQ5VTL8 546 aaKnown RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 ANKRD20A3Q5VUR7 823 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 ANKRD22Q5VYY1 191 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 TPGS2Q68CL5 300 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 RNF19BQ6ZMZ0 732 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 ZNF771Q7L3S4 317 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 SCD5Q86SK9 330 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 TDRPQ86YL5 185 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 GPR65Q8IYL9 337 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 SLC39A11Q8N1S5 342 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 ATAD1Q8NBU5 361 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 CCNYQ8ND76 341 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 UHMK1Q8TAS1 419 aaKnown RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 BCL7CQ8WUZ0 217 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 DPF3Q92784 378 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 CASP10Q92851 521 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 ZBTB9Q96C00 473 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 ZNF689Q96CS4 500 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 B3GALT6Q96L58 329 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 TTLL2Q9BWV7 592 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 RC3H2Q9HBD1 1191 aaKnown RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 PRDM5Q9NQX1 630 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 TMPRSS4Q9NRS4 437 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 GMIPQ9P107 970 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 HCSTQ9UBK5 93 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 AFF4Q9UHB7 1163 aaKnown RBP9.62□□□□□ -0.87
SMC1A-205ENST00000469129 SLC24A2Q9UI40 661 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 TRHDEQ9UKU6 1024 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 MAFFQ9ULX9 164 aa9.62□□□□□ -0.87
SMC1A-205ENST00000469129 WDR27A2RRH5 827 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 SLC38A8A6NNN8 435 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 ERI2A8K979 691 aaKnown RBP9.61□□□□□ -0.87
SMC1A-205ENST00000469129 FAM72CH0Y354 149 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 MAP3K6O95382 1288 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 APRTP07741 180 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 MLNP12872 115 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 STX2P32856 288 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 PBX3P40426 434 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 GARSP41250 739 aaKnown RBP9.61□□□□□ -0.87
SMC1A-205ENST00000469129 GPR15P49685 360 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 GNGT1P63211 74 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 RING1Q06587 406 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 AUHQ13825 339 aaKnown RBP9.61□□□□□ -0.87
SMC1A-205ENST00000469129 VEPH1Q14D04 833 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 LONRF1Q17RB8 773 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 FAM72AQ5TYM5 149 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 MANEALQ5VSG8 457 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 NUGGCQ68CJ6 796 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 FAM72DQ6L9T8 149 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 TIGD7Q6NT04 549 aaPredicted RBP9.61□□□□□ -0.87
SMC1A-205ENST00000469129 PRSS55Q6UWB4 352 aaPredicted RBP9.61□□□□□ -0.87
SMC1A-205ENST00000469129 LRRC31Q6UY01 552 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 TMEM173Q86WV6 379 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms