RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 HOXC11O43248 304 aaPredicted RBP5.72□□□□□ -1.49
LSM5-209ENST00000468872 CNPP09543 421 aaKnown RBP5.72□□□□□ -1.49
LSM5-209ENST00000468872 FAM163BP0C2L3 166 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 GALNSP34059 522 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 FOXL2P58012 376 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 TLE2Q04725 743 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 CCDC15Q0P6D6 951 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 TBX2Q13207 712 aaPredicted RBP5.72□□□□□ -1.49
LSM5-209ENST00000468872 DCTN1Q14203 1278 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 EZH2Q15910 746 aaKnown RBP5.72□□□□□ -1.49
LSM5-209ENST00000468872 TBRG1Q3YBR2 411 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 AARS2Q5JTZ9 985 aaKnown RBP5.72□□□□□ -1.49
LSM5-209ENST00000468872 PCID2Q5JVF3 399 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 CEP85Q6P2H3 762 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 KIRREL2Q6UWL6 708 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 RINLQ6ZS11 566 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 BBS12Q6ZW61 710 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 RASGRP2Q7LDG7 609 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 C12orf76Q8N812 135 aaPredicted RBP5.72□□□□□ -1.49
LSM5-209ENST00000468872 OR52L2PQ8NGH6 319 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 SLC2A12Q8TD20 617 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 SCARB1Q8WTV0 552 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 TRMT61AQ96FX7 289 aaKnown RBP5.72□□□□□ -1.49
LSM5-209ENST00000468872 MPP4Q96JB8 637 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 SNX18Q96RF0 628 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 CINPQ9BW66 212 aaPredicted RBP5.72□□□□□ -1.49
LSM5-209ENST00000468872 ARHGAP39Q9C0H5 1083 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 CDCP1Q9H5V8 836 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 USP29Q9HBJ7 922 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 TMEM160Q9NX00 188 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 ZNF70Q9UC06 446 aaPredicted RBP5.72□□□□□ -1.49
LSM5-209ENST00000468872 VPS4AQ9UN37 437 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 SLC12A4Q9UP95 1085 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 DNAJC16Q9Y2G8 782 aa5.72□□□□□ -1.49
LSM5-209ENST00000468872 RRP7AQ9Y3A4 280 aaKnown RBP5.72□□□□□ -1.49
LSM5-209ENST00000468872 AGAP5A6NIR3 686 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 MBD3L5A6NJ08 208 aaPredicted RBP5.71□□□□□ -1.5
LSM5-209ENST00000468872 STX16-NPEPL1H3BU86 382 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 STX16O14662 325 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 APEHP13798 732 aaKnown RBP5.71□□□□□ -1.5
LSM5-209ENST00000468872 MCM2P49736 904 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 TUBP50607 506 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 TAS2R50P59544 299 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 UBE3AQ05086 875 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 CBFBQ13951 182 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 SRSF7Q16629 238 aaKnown RBP eCLIP5.71□□□□□ -1.5
LSM5-209ENST00000468872 LRRC24Q50LG9 513 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 ZNF484Q5JVG2 852 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 MAP3K21Q5TCX8 1036 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 DENND2CQ68D51 928 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 TMED8Q6PL24 325 aaPredicted RBP5.71□□□□□ -1.5
LSM5-209ENST00000468872 SYNE3Q6ZMZ3 975 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 HEATR4Q86WZ0 1026 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 LINC01465Q8N7H1 131 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 FAM71DQ8N9W8 422 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 GLMPQ8WWB7 406 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 TBC1D5Q92609 795 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 REPS1Q96D71 796 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 KTI12Q96EK9 354 aaPredicted RBP5.71□□□□□ -1.5
LSM5-209ENST00000468872 NAF1Q96HR8 494 aaKnown RBP5.71□□□□□ -1.5
LSM5-209ENST00000468872 KAZALD1Q96I82 304 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 MMS19Q96T76 1030 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 MACROD1Q9BQ69 325 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 ELOVL1Q9BW60 279 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 RMI1Q9H9A7 625 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 PLEKHA2Q9HB19 425 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 ABHD10Q9NUJ1 306 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 PCDHA10Q9Y5I2 948 aa5.71□□□□□ -1.5
LSM5-209ENST00000468872 SETD1BQ9UPS6 1966 aaKnown RBP5.71□□□□□ -1.5
LSM5-209ENST00000468872 TBC1D3DA0A087WVF3 549 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 TBC1D3IA0A087WXS9 549 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 TBC1D3EA0A087X179 549 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 TBC1D3KA0A087X1G2 549 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 TBC1D3BA6NDS4 549 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 TBC1D3FA6NER0 549 aaPredicted RBP5.7□□□□□ -1.5
LSM5-209ENST00000468872 TBC1D3LB9A6J9 549 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 PRRT4C9JH25 899 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 J3KRW8 73 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 ZNF213O14771 459 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 JTBO76095 146 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 CYP3A4P08684 503 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 TBC1D3HP0C7X1 549 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 GRK5P34947 590 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 JAK3P52333 1124 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 CYP4F2P78329 520 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 TLE3Q04726 772 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 CHRNDQ07001 517 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 G3BP1Q13283 466 aaKnown RBP eCLIP5.7□□□□□ -1.5
LSM5-209ENST00000468872 DLGAP5Q15398 846 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 EPHA10Q5JZY3 1008 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 TBC1D3GQ6DHY5 549 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 TBC1D3CQ6IPX1 549 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 NAPRTQ6XQN6 538 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 SLC29A4Q7RTT9 530 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 TBC1D3Q8IZP1 549 aaPredicted RBP5.7□□□□□ -1.5
LSM5-209ENST00000468872 CLEC4CQ8WTT0 213 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 HTRA1Q92743 480 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 REEP2Q9BRK0 252 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 HERC2P3Q9BVR0 1158 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 NOD2Q9HC29 1040 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms