RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 ARHGEF4Q9NR80 690 aa18.09■□□□□ 0.49
RPL39-202ENST00000468844 ZMYM5Q9UJ78 669 aa18.09■□□□□ 0.49
RPL39-202ENST00000468844 MIA3Q5JRA6 1907 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 MYO10Q9HD67 2058 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 SCAMP3O14828 347 aaKnown RBP18.08■□□□□ 0.49
RPL39-202ENST00000468844 ACSL4O60488 711 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 TJP3O95049 919 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 TPI1P60174 286 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 AUHQ13825 339 aaKnown RBP18.08■□□□□ 0.49
RPL39-202ENST00000468844 DPYSQ14117 519 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 RAP1GAP2Q684P5 730 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 SLC9A4Q6AI14 798 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 BBS12Q6ZW61 710 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 RFX6Q8HWS3 928 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 NPAS3Q8IXF0 933 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 PLD5Q8N7P1 536 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 CEP112Q8N8E3 955 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 TTC16Q8NEE8 873 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 RIN3Q8TB24 985 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 USP13Q92995 863 aaPredicted RBP18.08■□□□□ 0.49
RPL39-202ENST00000468844 AZIN2Q96A70 460 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 RBM12Q9NTZ6 932 aaKnown RBP18.08■□□□□ 0.49
RPL39-202ENST00000468844 TDP1Q9NUW8 608 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 ETNK2Q9NVF9 386 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 AGO1Q9UL18 857 aaKnown RBP18.08■□□□□ 0.49
RPL39-202ENST00000468844 VANGL2Q9ULK5 521 aa18.08■□□□□ 0.49
RPL39-202ENST00000468844 GOLGA6L7A0A1B0GV03 622 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 E9PAM4 449 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 H3BRJ5 948 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 LEFTY2O00292 366 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 KRIT1O00522 736 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 FSHRP23945 695 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 HOXC13P31276 330 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 MTA1Q13330 715 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 CLUL1Q15846 466 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 CES5AQ6NT32 575 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 GET4Q7L5D6 327 aaPredicted RBP18.08■□□□□ 0.48
RPL39-202ENST00000468844 ZNF683Q8IZ20 524 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 MYLIPQ8WY64 445 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 FGF13Q92913 245 aa18.08■□□□□ 0.48
RPL39-202ENST00000468844 MAK16Q9BXY0 300 aaKnown RBP18.08■□□□□ 0.48
RPL39-202ENST00000468844 AMPD1P23109 780 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 EPHB2P29323 1055 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 SLC6A4P31645 630 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 HCAR3P49019 387 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 SLC11A2P49281 568 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 ZNF135P52742 658 aaPredicted RBP18.07■□□□□ 0.48
RPL39-202ENST00000468844 C2orf54Q08AI8 447 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 FBXL22Q6P050 247 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 Q6ZNB5 142 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 ARID3BQ8IVW6 561 aaPredicted RBP18.07■□□□□ 0.48
RPL39-202ENST00000468844 PRELID2Q8N945 189 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 ZSCAN18Q8TBC5 510 aaPredicted RBP18.07■□□□□ 0.48
RPL39-202ENST00000468844 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.07■□□□□ 0.48
RPL39-202ENST00000468844 MYEOVQ96EZ4 313 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 CFAP97Q9P2B7 532 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 SAE1Q9UBE0 346 aaPredicted RBP18.07■□□□□ 0.48
RPL39-202ENST00000468844 STOML2Q9UJZ1 356 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 R3HDM2Q9Y2K5 976 aaKnown RBP18.07■□□□□ 0.48
RPL39-202ENST00000468844 MFHAS1Q9Y4C4 1052 aa18.07■□□□□ 0.48
RPL39-202ENST00000468844 CTAGE15A4D2H0 777 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 CTAGE8P0CG41 777 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 ERCC2P18074 760 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 ATAT1Q5SQI0 421 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 NCBP2-AS2Q69YL0 99 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 GPR153Q6NV75 609 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 CTAGE6Q86UF2 777 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 CHSY1Q86X52 802 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 CTAGE4Q8IX94 777 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 SMRP1Q8NCR6 262 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 SH3RF2Q8TEC5 729 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 HAUS1Q96CS2 278 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 CDX2Q99626 313 aaPredicted RBP18.06■□□□□ 0.48
RPL39-202ENST00000468844 FAM118BQ9BPY3 351 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 IGLV3-10A0A075B6K4 115 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 APOC4-APOC2K7ER74 178 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 DCLK1O15075 740 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 APOC2P02655 101 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 PECAM1P16284 738 aaPredicted RBP18.06■□□□□ 0.48
RPL39-202ENST00000468844 TACR2P21452 398 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 IRAK1P51617 712 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 TFDP2Q14188 446 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 ADGRF1Q5T601 910 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 ACBD5Q5T8D3 534 aaPredicted RBP18.06■□□□□ 0.48
RPL39-202ENST00000468844 RWDD4Q6NW29 188 aaKnown RBP18.06■□□□□ 0.48
RPL39-202ENST00000468844 RFWD3Q6PCD5 774 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 HTR3DQ70Z44 454 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 MNS1Q8NEH6 495 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 IGSF8Q969P0 613 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 TBC1D31Q96DN5 1066 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 DCLK3Q9C098 648 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 MPP6Q9NZW5 540 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 SH3BP1Q9Y3L3 701 aa18.06■□□□□ 0.48
RPL39-202ENST00000468844 APOL1O14791 398 aa18.05■□□□□ 0.48
RPL39-202ENST00000468844 DAPK3O43293 454 aa18.05■□□□□ 0.48
RPL39-202ENST00000468844 SLU7O95391 586 aaKnown RBP18.05■□□□□ 0.48
RPL39-202ENST00000468844 LATS1O95835 1130 aa18.05■□□□□ 0.48
RPL39-202ENST00000468844 HTR7P34969 479 aa18.05■□□□□ 0.48
RPL39-202ENST00000468844 ZNF77Q15935 545 aa18.05■□□□□ 0.48
RPL39-202ENST00000468844 NPNTQ6UXI9 565 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms