RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 INSL5Q9Y5Q6 135 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 HS3ST4Q9Y661 456 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.55■□□□□ 0.72
SMC4-209ENST00000468653 HMBSP08397 361 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 ATP5C1P36542 298 aaKnown RBP19.55■□□□□ 0.72
SMC4-209ENST00000468653 BMPR1AP36894 532 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 KPNA1P52294 538 aaPredicted RBP19.55■□□□□ 0.72
SMC4-209ENST00000468653 AP1B1Q10567 949 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 PLD1Q13393 1074 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 C1orf74Q96LT6 269 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 MYRFLQ96LU7 910 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 LGMNQ99538 433 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 PABPC3Q9H361 631 aaKnown RBP19.55■□□□□ 0.72
SMC4-209ENST00000468653 PRDM12Q9H4Q4 367 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 CATSPERBQ9H7T0 1116 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 DNAJC17Q9NVM6 304 aaKnown RBP19.55■□□□□ 0.72
SMC4-209ENST00000468653 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.55■□□□□ 0.72
SMC4-209ENST00000468653 ZNF840PA6NDX5 716 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 NCAM2O15394 837 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 OPA1O60313 960 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 SPATA31D3P0C874 917 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 MLLT6P55198 1093 aaPredicted RBP19.55■□□□□ 0.72
SMC4-209ENST00000468653 SNX30Q5VWJ9 437 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 C4orf22Q6V702 233 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 SPATA31D4Q6ZUB0 917 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 ZNF276Q8N554 614 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 HTR3CQ8WXA8 447 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 CPT1BQ92523 772 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 DPF3Q92784 378 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 TRMT2BQ96GJ1 504 aaKnown RBP19.55■□□□□ 0.72
SMC4-209ENST00000468653 BTN2A3PQ96KV6 586 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 PWWP2AQ96N64 755 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 SEMA4AQ9H3S1 761 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 DNMT3LQ9UJW3 386 aa19.55■□□□□ 0.72
SMC4-209ENST00000468653 FARP1Q9Y4F1 1045 aaPredicted RBP19.55■□□□□ 0.72
SMC4-209ENST00000468653 E9PAM4 449 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 H3BQF6 201 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 FGF10O15520 208 aaPredicted RBP19.54■□□□□ 0.72
SMC4-209ENST00000468653 STK10O94804 968 aaKnown RBP19.54■□□□□ 0.72
SMC4-209ENST00000468653 MX2P20592 715 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 OAS2P29728 719 aaKnown RBP19.54■□□□□ 0.72
SMC4-209ENST00000468653 TUBP50607 506 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 NRG1Q02297 640 aaPredicted RBP19.54■□□□□ 0.72
SMC4-209ENST00000468653 RING1Q06587 406 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 PRKD1Q15139 912 aaPredicted RBP19.54■□□□□ 0.72
SMC4-209ENST00000468653 HECTD3Q5T447 861 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 MANEALQ5VSG8 457 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 DENND2CQ68D51 928 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 LRIG3Q6UXM1 1119 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 TRMT10CQ7L0Y3 403 aaKnown RBP19.54■□□□□ 0.72
SMC4-209ENST00000468653 DNAJB7Q7Z6W7 309 aaPredicted RBP19.54■□□□□ 0.72
SMC4-209ENST00000468653 HOOK3Q86VS8 718 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 NPWQ8N729 165 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 CCDC110Q8TBZ0 833 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 PRCCQ92733 491 aaPredicted RBP19.54■□□□□ 0.72
SMC4-209ENST00000468653 TCF25Q9BQ70 676 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 ALG13Q9NP73 1137 aaKnown RBP19.54■□□□□ 0.72
SMC4-209ENST00000468653 ENTPD7Q9NQZ7 604 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 RAB6BQ9NRW1 208 aa19.54■□□□□ 0.72
SMC4-209ENST00000468653 C5orf60A6NFR6 353 aa19.53■□□□□ 0.72
SMC4-209ENST00000468653 SMAPO00193 183 aa19.53■□□□□ 0.72
SMC4-209ENST00000468653 TGM5O43548 720 aa19.53■□□□□ 0.72
SMC4-209ENST00000468653 RRP9O43818 475 aaKnown RBP19.53■□□□□ 0.72
SMC4-209ENST00000468653 GCATO75600 419 aa19.53■□□□□ 0.72
SMC4-209ENST00000468653 ADH1AP07327 375 aa19.53■□□□□ 0.72
SMC4-209ENST00000468653 VAV1P15498 845 aa19.53■□□□□ 0.72
SMC4-209ENST00000468653 HOXC13P31276 330 aa19.53■□□□□ 0.72
SMC4-209ENST00000468653 PIK3R6Q5UE93 754 aa19.53■□□□□ 0.72
SMC4-209ENST00000468653 TP53INP2Q8IXH6 220 aa19.53■□□□□ 0.72
SMC4-209ENST00000468653 RBM15Q96T37 977 aaKnown RBP eCLIP19.53■□□□□ 0.725e-67■■■■■ 212.6
SMC4-209ENST00000468653 EMILIN2Q9BXX0 1053 aa19.53■□□□□ 0.72
SMC4-209ENST00000468653 UXTQ9UBK9 157 aaPredicted RBP19.53■□□□□ 0.72
SMC4-209ENST00000468653 LZTS1Q9Y250 596 aa19.53■□□□□ 0.72
SMC4-209ENST00000468653 RWDD3Q9Y3V2 267 aa19.53■□□□□ 0.72
SMC4-209ENST00000468653 HBS1LQ9Y450 684 aaKnown RBP19.53■□□□□ 0.72
SMC4-209ENST00000468653 GOLGA8MH3BSY2 632 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 ZNF189O75820 626 aaPredicted RBP19.52■□□□□ 0.72
SMC4-209ENST00000468653 CSPG5O95196 566 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 SYF2O95926 243 aaKnown RBP19.52■□□□□ 0.72
SMC4-209ENST00000468653 IGLV3-27P01718 113 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 PPP3CCP48454 512 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 FAM182AQ5T1J6 154 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 ANKRD22Q5VYY1 191 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 LRRC31Q6UY01 552 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 C14orf80Q86SX3 495 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 ITIH5Q86UX2 942 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 NAT8LQ8N9F0 302 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 PSMG2Q969U7 264 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 P2RY11Q96G91 374 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 KLHL5Q96PQ7 755 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 KLC2Q9H0B6 622 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 BRD8Q9H0E9 1235 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 CDC42EP4Q9H3Q1 356 aaKnown RBP19.52■□□□□ 0.72
SMC4-209ENST00000468653 SEPT10Q9P0V9 454 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 NEU3Q9UQ49 428 aa19.52■□□□□ 0.72
SMC4-209ENST00000468653 ERVFC1P60507 584 aa19.52■□□□□ 0.71
SMC4-209ENST00000468653 IFFO1Q0D2I5 559 aa19.52■□□□□ 0.71
SMC4-209ENST00000468653 MTA1Q13330 715 aa19.52■□□□□ 0.71
SMC4-209ENST00000468653 MS4A13Q5J8X5 152 aa19.52■□□□□ 0.71
SMC4-209ENST00000468653 NUGGCQ68CJ6 796 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms