RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 ADIGQ0VDE8 80 aa13.62□□□□□ -0.23
PTPN7-207ENST00000468385 DPYDQ12882 1025 aa13.62□□□□□ -0.23
PTPN7-207ENST00000468385 TTC31Q49AM3 519 aaPredicted RBP13.62□□□□□ -0.23
PTPN7-207ENST00000468385 ZNF776Q68DI1 518 aaPredicted RBP13.62□□□□□ -0.23
PTPN7-207ENST00000468385 PDCD7Q8N8D1 485 aaKnown RBP13.62□□□□□ -0.23
PTPN7-207ENST00000468385 GOLGA1Q92805 767 aa13.62□□□□□ -0.23
PTPN7-207ENST00000468385 SNX21Q969T3 373 aa13.62□□□□□ -0.23
PTPN7-207ENST00000468385 MYO19Q96H55 970 aa13.62□□□□□ -0.23
PTPN7-207ENST00000468385 LMLNQ96KR4 655 aa13.62□□□□□ -0.23
PTPN7-207ENST00000468385 MTG2Q9H4K7 406 aa13.62□□□□□ -0.23
PTPN7-207ENST00000468385 ABCC13Q9NSE7 274 aa13.62□□□□□ -0.23
PTPN7-207ENST00000468385 SUN2Q9UH99 717 aa13.62□□□□□ -0.23
PTPN7-207ENST00000468385 CABIN1Q9Y6J0 2220 aa13.62□□□□□ -0.23
PTPN7-207ENST00000468385 IGSF10Q6WRI0 2623 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 URB1O60287 2271 aaKnown RBP13.61□□□□□ -0.23
PTPN7-207ENST00000468385 KNL1Q8NG31 2342 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 A0A1B0GTQ1 180 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 GOLGA6L7A0A1B0GV03 622 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 SLC6A4P31645 630 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 DAOAP59103 153 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 RACK1P63244 317 aaKnown RBP13.61□□□□□ -0.23
PTPN7-207ENST00000468385 BST2Q10589 180 aaKnown RBP13.61□□□□□ -0.23
PTPN7-207ENST00000468385 CCDC157Q569K6 752 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 FAM133BQ5BKY9 247 aaKnown RBP13.61□□□□□ -0.23
PTPN7-207ENST00000468385 PIK3R6Q5UE93 754 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 KIAA0895LQ68EN5 471 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 RFWD3Q6PCD5 774 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 USP30Q70CQ3 517 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 ADAT2Q7Z6V5 191 aaKnown RBP13.61□□□□□ -0.23
PTPN7-207ENST00000468385 ENGASEQ8NFI3 743 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 UBA3Q8TBC4 463 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 KCTD13Q8WZ19 329 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 CCDC47Q96A33 483 aaKnown RBP13.61□□□□□ -0.23
PTPN7-207ENST00000468385 EEF2KMTQ96G04 330 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 SLC6A18Q96N87 628 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
PTPN7-207ENST00000468385 RSPH9Q9H1X1 276 aaPredicted RBP13.61□□□□□ -0.23
PTPN7-207ENST00000468385 PABPC3Q9H361 631 aaKnown RBP13.61□□□□□ -0.23
PTPN7-207ENST00000468385 EBF2Q9HAK2 575 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 FTSJ1Q9UET6 329 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 SERGEFQ9UGK8 458 aa13.61□□□□□ -0.23
PTPN7-207ENST00000468385 FAM237AA0A1B0GTK4 181 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 A0A1W2PPC4 97 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 C10orf142B7Z368 130 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 E9PAM4 449 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 VILLO15195 856 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 DFNA5O60443 496 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 TBL1XO60907 577 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 IGLV3-27P01718 113 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 WNT1P04628 370 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 POLR2EP19388 210 aaKnown RBP13.6□□□□□ -0.23
PTPN7-207ENST00000468385 SYKP43405 635 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 NDUFA8P51970 172 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 CUL2Q13617 745 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 SHBQ15464 509 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 EDRF1Q3B7T1 1238 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 INAVAQ3KP66 663 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 CBWD6Q4V339 395 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 PKDCCQ504Y2 493 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 SGO2Q562F6 1265 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 CBWD3Q5JTY5 395 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 CBWD5Q5RIA9 395 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 PRAMEF14Q5SWL7 426 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 MPP7Q5T2T1 576 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 MSANTD2Q6P1R3 559 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 TMPRSS12Q86WS5 348 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 GATAD2AQ86YP4 633 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 SIX6OS1Q8N1H7 587 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 SCML4Q8N228 414 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 TTC17Q96AE7 1141 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 ELF4Q99607 663 aaPredicted RBP13.6□□□□□ -0.23
PTPN7-207ENST00000468385 ACE2Q9BYF1 805 aaPredicted RBP13.6□□□□□ -0.23
PTPN7-207ENST00000468385 IRX2Q9BZI1 471 aaPredicted RBP13.6□□□□□ -0.23
PTPN7-207ENST00000468385 CNGB3Q9NQW8 809 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 HESX1Q9UBX0 185 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 SCML1Q9UN30 329 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 NCKAP1Q9Y2A7 1128 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 PCDHGA1Q9Y5H4 931 aa13.6□□□□□ -0.23
PTPN7-207ENST00000468385 PLXNA2O75051 1894 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 FAM47DPA6NHR8 397 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 CBX4O00257 560 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 O00370 1275 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 PLK4O00444 970 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 ACSL4O60488 711 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 STX10O60499 249 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 SIN3BO75182 1162 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 GABBR2O75899 941 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 SETSIPP0DME0 302 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 LCP1P13796 627 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 CD19P15391 556 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 GALCP54803 685 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 CLDN6P56747 220 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 C21orf59P57076 290 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 HNRNPA1L2Q32P51 320 aaKnown RBP13.59□□□□□ -0.23
PTPN7-207ENST00000468385 MFN1Q8IWA4 741 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 UBR7Q8N806 425 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 MYEOVQ96EZ4 313 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 MRGPRX3Q96LB0 322 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 PRICKLE1Q96MT3 831 aaPredicted RBP13.59□□□□□ -0.23
PTPN7-207ENST00000468385 FBXL12Q9NXK8 326 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms