RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 SCOCQ9UIL1 159 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 CDH22Q9UJ99 828 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 DNMT3LQ9UJW3 386 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 MYBPHLA2RUH7 354 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 MAPK13O15264 365 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 ADAM12O43184 909 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 CPP00450 1065 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 GOLGA7BQ2TAP0 167 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 FIGNQ5HY92 759 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 ENOSF1Q7L5Y1 443 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 TRIM59Q8IWR1 403 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 RFFLQ8WZ73 363 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 SUSD6Q92537 303 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 MYADMQ96S97 322 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 ABCF3Q9NUQ8 709 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 WDR35Q9P2L0 1181 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 DNMT3BQ9UBC3 853 aaKnown RBP6.19□□□□□ -1.42
SHQ1-205ENST00000468371 STAP1Q9ULZ2 295 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 CPQQ9Y646 472 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 CFAP69A5D8W1 941 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 F8VZ95 297 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 GOLGA8RI6L899 631 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 SLC16A3O15427 465 aaKnown RBP6.19□□□□□ -1.42
SHQ1-205ENST00000468371 SHOX2O60902 331 aaPredicted RBP6.19□□□□□ -1.42
SHQ1-205ENST00000468371 SHBGP04278 402 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 HAPLN1P10915 354 aaPredicted RBP6.19□□□□□ -1.42
SHQ1-205ENST00000468371 NQO1P15559 274 aaKnown RBP6.19□□□□□ -1.42
SHQ1-205ENST00000468371 CEBPBP17676 345 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 GTF2H1P32780 548 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 DHPSP49366 369 aaPredicted RBP6.19□□□□□ -1.42
SHQ1-205ENST00000468371 CCR3P51677 355 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 BCAT1P54687 386 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 RWDD2BP57060 319 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 ARL13BQ3SXY8 428 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 C4orf33Q8N1A6 199 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 TMEM35BQ8NCS4 154 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 UBA3Q8TBC4 463 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 TMA16Q96EY4 203 aaKnown RBP6.19□□□□□ -1.42
SHQ1-205ENST00000468371 BTBD6Q96KE9 485 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 SPON2Q9BUD6 331 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 SIK2Q9H0K1 926 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 MIR1-1HGQ9H1L0 117 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 OLA1Q9NTK5 396 aaKnown RBP6.19□□□□□ -1.42
SHQ1-205ENST00000468371 ARL2BPQ9Y2Y0 163 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 PCDHB9Q9Y5E1 797 aa6.19□□□□□ -1.42
SHQ1-205ENST00000468371 hCG_2014768A0A024R1R8 64 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 KANSL1LA0AUZ9 987 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 EDIL3O43854 480 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ATP5BP06576 529 aaKnown RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 NCAM1P13591 858 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 TARSP26639 723 aaKnown RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ACADSBP45954 432 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 TKTL1P51854 596 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 SEC13P55735 322 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ELF3P78545 371 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 GAD2Q05329 585 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 DNAJC3Q13217 504 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 SIM2Q14190 667 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 PHLDB3Q6NSJ2 640 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 AADACL2Q6P093 401 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 PARM1Q6UWI2 310 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 FRMD5Q7Z6J6 570 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 CHSY1Q86X52 802 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 NPAS3Q8IXF0 933 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ZNF557Q8N988 423 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 CCDC89Q8N998 374 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 SLC30A5Q8TAD4 765 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 TAS1R2Q8TE23 839 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 BCL7CQ8WUZ0 217 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 TMEM176AQ96HP8 235 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 TMEM209Q96SK2 561 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 P2RY13Q9BPV8 354 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 FAM129AQ9BZQ8 928 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 THAP2Q9H0W7 228 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 SMYD3Q9H7B4 428 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 FAM86C1Q9NVL1 165 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 IRAK4Q9NWZ3 460 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 MARCH2Q9P0N8 246 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ANAPC7Q9UJX3 599 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 NCKAP1Q9Y2A7 1128 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 SIK3Q9Y2K2 1263 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ALG6Q9Y672 507 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 H0Y626 953 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 SGK1O00141 431 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 PIK3R2O00459 728 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 PPEF2O14830 753 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 AGTP01019 485 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 VDRP11473 427 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 CCDC130P13994 396 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 GNA15P30679 374 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 CHRNA3P32297 505 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 NSFP46459 744 aaKnown RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 KCNJ2P63252 427 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 IRX4P78413 519 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 SATB1Q01826 763 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 KDSRQ06136 332 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 FBXO43Q4G163 708 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 GRAMD4Q6IC98 578 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 SPOPLQ6IQ16 392 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 SERPINA13PQ6UXR4 307 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms