RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 CHSY1Q86X52 802 aa18.18■□□□□ 0.5
COL7A1-206ENST00000466591 FAM114A1Q8IWE2 563 aa18.18■□□□□ 0.5
COL7A1-206ENST00000466591 OR2I1PQ8NGU4 316 aa18.18■□□□□ 0.5
COL7A1-206ENST00000466591 AZIN2Q96A70 460 aa18.18■□□□□ 0.5
COL7A1-206ENST00000466591 ZSWIM1Q9BR11 485 aa18.18■□□□□ 0.5
COL7A1-206ENST00000466591 POPDC2Q9HBU9 364 aa18.18■□□□□ 0.5
COL7A1-206ENST00000466591 COX16Q9P0S2 106 aa18.18■□□□□ 0.5
COL7A1-206ENST00000466591 SPAARA0A1B0GVQ0 90 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 KCNJ18B7U540 433 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 E5RJQ4 531 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 BCAT2O15382 392 aaPredicted RBP18.17■□□□□ 0.5
COL7A1-206ENST00000466591 IGLV3-27P01718 113 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 ASLP04424 464 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 SLC6A4P31645 630 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 GPD2P43304 727 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 COPAP53621 1224 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 GRIK2Q13002 908 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 SEMA3BQ13214 749 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 NNTQ13423 1086 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 CAMK2GQ13555 558 aaPredicted RBP18.17■□□□□ 0.5
COL7A1-206ENST00000466591 HNRNPDQ14103 355 aaKnown RBP18.17■□□□□ 0.5
COL7A1-206ENST00000466591 TEAD4Q15561 434 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 EXOC3L4Q17RC7 722 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 ZNF776Q68DI1 518 aaPredicted RBP18.17■□□□□ 0.5
COL7A1-206ENST00000466591 TRIM65Q6PJ69 517 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 ADAT2Q7Z6V5 191 aaKnown RBP18.17■□□□□ 0.5
COL7A1-206ENST00000466591 TAC4Q86UU9 113 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 ADIPOR2Q86V24 386 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 LGI2Q8N0V4 545 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 CFAP52Q8N1V2 620 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 ATP6V0D2Q8N8Y2 350 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 ZNF606Q8WXB4 792 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 BTBD1Q9H0C5 482 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 APEX2Q9UBZ4 518 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 EIF2B4Q9UI10 523 aaKnown RBP18.17■□□□□ 0.5
COL7A1-206ENST00000466591 DACH1Q9UI36 760 aa18.17■□□□□ 0.5
COL7A1-206ENST00000466591 METTL12A8MUP2 240 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 F5H5T6 163 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 CER1O95813 267 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 SPINK2P20155 84 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 ABCB4P21439 1286 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 KRT9P35527 623 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 NNMTP40261 264 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 RPS24P62847 133 aaKnown RBP18.16■□□□□ 0.5
COL7A1-206ENST00000466591 YWHAZP63104 245 aaKnown RBP18.16■□□□□ 0.5
COL7A1-206ENST00000466591 CDK17Q00537 523 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 PTK2Q05397 1052 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 DCAF6Q58WW2 860 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 FAM133BQ5BKY9 247 aaKnown RBP18.16■□□□□ 0.5
COL7A1-206ENST00000466591 IL27RAQ6UWB1 636 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 PASD1Q8IV76 773 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.16■□□□□ 0.5
COL7A1-206ENST00000466591 SETD7Q8WTS6 366 aaKnown RBP18.16■□□□□ 0.5
COL7A1-206ENST00000466591 STK32AQ8WU08 396 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 FCRL2Q96LA5 508 aaPredicted RBP18.16■□□□□ 0.5
COL7A1-206ENST00000466591 NUCKS1Q9H1E3 243 aaKnown RBP18.16■□□□□ 0.5
COL7A1-206ENST00000466591 THAP9Q9H5L6 903 aa18.16■□□□□ 0.5
COL7A1-206ENST00000466591 KIAA1522Q9P206 1035 aaPredicted RBP18.16■□□□□ 0.5
COL7A1-206ENST00000466591 CNOT1A5YKK6 2376 aaKnown RBP18.15■□□□□ 0.5
COL7A1-206ENST00000466591 FAM47DPA6NHR8 397 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 FSBPO95073 299 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 LUC7L3O95232 432 aaKnown RBP18.15■□□□□ 0.5
COL7A1-206ENST00000466591 SEMA4FO95754 770 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 TRUB2O95900 331 aaKnown RBP18.15■□□□□ 0.5
COL7A1-206ENST00000466591 SLC2A3P11169 496 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 PRKCSHP14314 528 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-206ENST00000466591 CSKP41240 450 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 MATKP42679 507 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 ZBTB16Q05516 673 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 SLC14A1Q13336 389 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 PDCLQ13371 301 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 MEA1Q16626 185 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 ZC3H12AQ5D1E8 599 aaKnown RBP18.15■□□□□ 0.5
COL7A1-206ENST00000466591 MS4A13Q5J8X5 152 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 RAP1GAP2Q684P5 730 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 GJB7Q6PEY0 223 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 UNQ6494/PRO21346Q6UXR6 183 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 MLKLQ8NB16 471 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 FIBINQ8TAL6 211 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 BTN2A3PQ96KV6 586 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 PRICKLE1Q96MT3 831 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-206ENST00000466591 ADAM33Q9BZ11 813 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 PCED1AQ9H1Q7 454 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 TMEM245Q9H330 911 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 DNAAF2Q9NVR5 837 aaKnown RBP18.15■□□□□ 0.5
COL7A1-206ENST00000466591 NFE2L3Q9Y4A8 694 aa18.15■□□□□ 0.5
COL7A1-206ENST00000466591 ADAMTS9Q9P2N4 1935 aa18.14■□□□□ 0.49
COL7A1-206ENST00000466591 GABBR2O75899 941 aa18.14■□□□□ 0.49
COL7A1-206ENST00000466591 KRT37O76014 449 aa18.14■□□□□ 0.49
COL7A1-206ENST00000466591 TRIM16O95361 564 aa18.14■□□□□ 0.49
COL7A1-206ENST00000466591 SLC9A1P19634 815 aa18.14■□□□□ 0.49
COL7A1-206ENST00000466591 AFF3P51826 1226 aaKnown RBP18.14■□□□□ 0.49
COL7A1-206ENST00000466591 RPS14P62263 151 aaKnown RBP18.14■□□□□ 0.49
COL7A1-206ENST00000466591 PTPRNQ16849 979 aa18.14■□□□□ 0.49
COL7A1-206ENST00000466591 RABGAP1LQ5R372 815 aa18.14■□□□□ 0.49
COL7A1-206ENST00000466591 SYPL2Q5VXT5 272 aa18.14■□□□□ 0.49
COL7A1-206ENST00000466591 NADSYN1Q6IA69 706 aa18.14■□□□□ 0.49
COL7A1-206ENST00000466591 OR6B2Q6IFH4 312 aa18.14■□□□□ 0.49
COL7A1-206ENST00000466591 NAXDQ8IW45 347 aa18.14■□□□□ 0.49
COL7A1-206ENST00000466591 DHX40Q8IX18 779 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms